RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 LRBAP50851 2863 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 TRAV12-2A0A075B6T6 113 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 TEX49A0A1B0GTD5 131 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 C17orf98A8MV24 154 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 PLAUP00749 431 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 ZNF883P0CG24 379 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 PYYP10082 97 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 FCER1GP30273 86 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 CCL8P80075 99 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 MIR17HGQ75NE6 70 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 ZNRD1Q9P1U0 126 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 TANC2Q9HCD6 1990 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 INS-IGF2F8WCM5 200 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 P01737 135 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 ZNF137PP52743 207 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 ATXN8Q156A1 80 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 PRR25Q96S07 402 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 A0A1B0GUT8 65 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 H3BT86 120 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 ELANEP08246 267 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 UBE2L3P68036 154 aaKnown RBP4.41□□□□□ -1.7
RFX4-201ENST00000229387 CD164Q04900 197 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 ZGRF1Q86YA3 2104 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 IL17DQ8TAD2 202 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 RTL8AQ9BWD3 113 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 GNG12Q9UBI6 72 aa4.41□□□□□ -1.7
RFX4-201ENST00000229387 MAP1AP78559 2803 aaPredicted RBP4.41□□□□□ -1.7
RFX4-201ENST00000229387 VPREB1P12018 145 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 PLNP26678 52 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 SRSF9Q13242 221 aaKnown RBP eCLIP4.4□□□□□ -1.7
RFX4-201ENST00000229387 LINC01620Q4KN68 170 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 ZNF329Q86UD4 541 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 CYSTM1Q9H1C7 97 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 RPUSD1Q9UJJ7 312 aaKnown RBP4.4□□□□□ -1.7
RFX4-201ENST00000229387 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 BSNQ9UPA5 3926 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 SPTBN1Q01082 2364 aaKnown RBP4.4□□□□□ -1.7
RFX4-201ENST00000229387 AGRNO00468 2067 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 C12orf77C9JDV5 145 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 J3QT63 122 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 SLC25A16P16260 332 aa4.4□□□□□ -1.7
RFX4-201ENST00000229387 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.4□□□□□ -1.71
RFX4-201ENST00000229387 C15orf61A6NNL5 157 aa4.4□□□□□ -1.71
RFX4-201ENST00000229387 UPK2O00526 184 aa4.4□□□□□ -1.71
RFX4-201ENST00000229387 AVPP01185 164 aa4.4□□□□□ -1.71
RFX4-201ENST00000229387 HOXB4P17483 251 aaPredicted RBP4.4□□□□□ -1.71
RFX4-201ENST00000229387 CRIP2P52943 208 aaPredicted RBP4.4□□□□□ -1.71
RFX4-201ENST00000229387 DLX1P56177 255 aa4.4□□□□□ -1.71
RFX4-201ENST00000229387 EIF4EBP1Q13541 118 aaPredicted RBP4.4□□□□□ -1.71
RFX4-201ENST00000229387 CDSNQ15517 529 aa4.4□□□□□ -1.71
RFX4-201ENST00000229387 SERP2Q8N6R1 65 aa4.4□□□□□ -1.71
RFX4-201ENST00000229387 ZNF497Q6ZNH5 498 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 LINC00596Q86U02 117 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 ORMDL3Q8N138 153 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 LINC01561Q8N1V8 128 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 METTL26Q96S19 204 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 NABP2Q9BQ15 211 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 PRO1854Q9UHT4 67 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 TMEM30CPA0ZSE6 113 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 PGPA6NDG6 321 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 CCL24O00175 119 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 PRYO14603 147 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 ERVK-16P61578 105 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 RPL39P5Q59GN2 51 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 Q8N8P6 123 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 TNRC6BQ9UPQ9 1833 aaKnown RBP4.39□□□□□ -1.71
RFX4-201ENST00000229387 CACNA1BQ00975 2339 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 IGHV1-18A0A0C4DH31 117 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 CFC1BP0CG36 223 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 CFC1P0CG37 223 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 PRB4P10163 310 aaPredicted RBP4.39□□□□□ -1.71
RFX4-201ENST00000229387 NPC2P61916 151 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 VMA21Q3ZAQ7 101 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 ASPHD1Q5U4P2 390 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 CD177Q8N6Q3 437 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 ITLN1Q8WWA0 313 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 FMC1Q96HJ9 113 aa4.39□□□□□ -1.71
RFX4-201ENST00000229387 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 LINC00473A8K010 186 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 SPINT2O43291 252 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 LEPP41159 167 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 LINC00322Q6ZN03 302 aaPredicted RBP4.38□□□□□ -1.71
RFX4-201ENST00000229387 C10orf105Q8TEF2 133 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 SS18L1O75177 396 aaPredicted RBP4.38□□□□□ -1.71
RFX4-201ENST00000229387 PRSS1P07477 247 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 HERVK_113P61574 105 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 RPL18AQ02543 176 aaKnown RBP4.38□□□□□ -1.71
RFX4-201ENST00000229387 FAM167A-AS1Q96KT0 104 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 PTPRQQ9UMZ3 2332 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 WNK2Q9Y3S1 2297 aa4.38□□□□□ -1.71
RFX4-201ENST00000229387 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 TRGV8A0A0C4DH27 118 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 TRBV6-1A0A0K0K1D8 114 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 D6R8Y8 96 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 MRPS36P82909 103 aaKnown RBP4.37□□□□□ -1.71
RFX4-201ENST00000229387 FAM104BQ5XKR9 115 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 TRAV3A0A0B4J244 114 aa4.37□□□□□ -1.71
RFX4-201ENST00000229387 IGHV3-48P01763 117 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms