RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 NBL1P41271 181 aa10.77□□□□□ -0.68
HCFC2-201ENST00000229330 RBM3P98179 157 aaKnown RBP10.77□□□□□ -0.68
HCFC2-201ENST00000229330 IGHV3-16A0A0C4DH30 117 aa10.77□□□□□ -0.68
HCFC2-201ENST00000229330 PIP4P2Q8N4L2 257 aa10.77□□□□□ -0.68
HCFC2-201ENST00000229330 TM2D2Q9BX73 214 aa10.77□□□□□ -0.68
HCFC2-201ENST00000229330 TRAV12-2A0A075B6T6 113 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 INS-IGF2F8WCM5 200 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 ZFP2Q6ZN57 461 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 A0A1B0GX51 115 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 SPRY2O43597 315 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 H3BT86 120 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 RPL32P62910 135 aaKnown RBP10.77□□□□□ -0.69
HCFC2-201ENST00000229330 NDUFA11Q86Y39 141 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 C1orf43Q9BWL3 253 aa10.77□□□□□ -0.69
HCFC2-201ENST00000229330 K7EIM0 57 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 TCL1BO95988 128 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 LINC00322Q6ZN03 302 aaPredicted RBP10.76□□□□□ -0.69
HCFC2-201ENST00000229330 LHBP01229 141 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 UBE2E1P51965 193 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 DEFB131AP59861 70 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 UBE2E2Q96LR5 201 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 LTBP2Q14767 1821 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 DSCR9P59020 149 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 TMEM258P61165 79 aa10.76□□□□□ -0.69
HCFC2-201ENST00000229330 KAAG1Q9UBP8 84 aa10.75□□□□□ -0.69
HCFC2-201ENST00000229330 C2orf16Q68DN1 1984 aa10.75□□□□□ -0.69
HCFC2-201ENST00000229330 MRPL36Q9P0J6 103 aaKnown RBP10.75□□□□□ -0.69
HCFC2-201ENST00000229330 CRLF1O75462 422 aa10.75□□□□□ -0.69
HCFC2-201ENST00000229330 Q9H8V8 135 aa10.75□□□□□ -0.69
HCFC2-201ENST00000229330 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
HCFC2-201ENST00000229330 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
HCFC2-201ENST00000229330 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
HCFC2-201ENST00000229330 FAM215AQ9Y5M1 114 aa10.74□□□□□ -0.69
HCFC2-201ENST00000229330 CADP27708 2225 aa10.74□□□□□ -0.69
HCFC2-201ENST00000229330 ABCA4P78363 2273 aa10.74□□□□□ -0.69
HCFC2-201ENST00000229330 SUMO4Q6EEV6 95 aa10.74□□□□□ -0.69
HCFC2-201ENST00000229330 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
HCFC2-201ENST00000229330 CITED2Q99967 270 aaPredicted RBP10.74□□□□□ -0.69
HCFC2-201ENST00000229330 SPRNQ5BIV9 151 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 RITA1Q96K30 269 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 C11orf86A6NJI1 115 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 BRWD1-AS2P59051 145 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 SRCAPQ6ZRS2 3230 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 WT1P19544 449 aaPredicted RBP10.73□□□□□ -0.69
HCFC2-201ENST00000229330 MLST8Q9BVC4 326 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 BPESC1Q9GZL8 116 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
HCFC2-201ENST00000229330 ZNF106Q9H2Y7 1883 aaKnown RBP10.73□□□□□ -0.69
HCFC2-201ENST00000229330 B4DSR2 109 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 C2orf91Q6ZV80 131 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 DSCR8Q96T75 97 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 BDP1A6H8Y1 2624 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 F6UB75 175 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 Q8N1Y9 231 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 ORMDL1Q9P0S3 153 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 WI2-2373I1.2A0A1W2PRP0 233 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 E7EUB6 86 aa10.72□□□□□ -0.69
HCFC2-201ENST00000229330 Q71RC1 249 aaPredicted RBP10.71□□□□□ -0.69
HCFC2-201ENST00000229330 CTSZQ9UBR2 303 aa10.71□□□□□ -0.69
HCFC2-201ENST00000229330 LGALS9O00182 355 aa10.71□□□□□ -0.69
HCFC2-201ENST00000229330 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
HCFC2-201ENST00000229330 MUC6Q6W4X9 2439 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 IGLV2-23P01705 113 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 CLEC2BQ92478 149 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 TIMM17AQ99595 171 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 IGKV1D-37A0A075B6S9 117 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 DPH3Q96FX2 82 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 SPATA25Q9BR10 227 aa10.71□□□□□ -0.7
HCFC2-201ENST00000229330 NXPH4O95158 308 aa10.7□□□□□ -0.7
HCFC2-201ENST00000229330 ATP5G1P05496 136 aa10.7□□□□□ -0.7
HCFC2-201ENST00000229330 CLUHP3Q96NS8 147 aa10.7□□□□□ -0.7
HCFC2-201ENST00000229330 IGLV11-55A0A075B6I3 123 aa10.7□□□□□ -0.7
HCFC2-201ENST00000229330 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
HCFC2-201ENST00000229330 TECTAO75443 2155 aa10.7□□□□□ -0.7
HCFC2-201ENST00000229330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.69□□□□□ -0.7
HCFC2-201ENST00000229330 IGKV2-29A2NJV5 120 aaPredicted RBP10.69□□□□□ -0.7
HCFC2-201ENST00000229330 LINC00310P59036 64 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 RUSC1-AS1Q66K80 236 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 CRYGCP07315 174 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 CTSGP08311 255 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 Q8N976 141 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 GTF3C1Q12789 2109 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 XCL2Q9UBD3 114 aa10.69□□□□□ -0.7
HCFC2-201ENST00000229330 NCOA6Q14686 2063 aaPredicted RBP10.68□□□□□ -0.7
HCFC2-201ENST00000229330 IGKV2D-26A0A0A0MRZ7 120 aa10.68□□□□□ -0.7
HCFC2-201ENST00000229330 H0YGX0 51 aa10.68□□□□□ -0.7
HCFC2-201ENST00000229330 TEX22C9J3V5 150 aa10.68□□□□□ -0.7
HCFC2-201ENST00000229330 PROP1O75360 226 aa10.68□□□□□ -0.7
HCFC2-201ENST00000229330 BUB3O43684 328 aa10.67□□□□□ -0.7
HCFC2-201ENST00000229330 C11orf44Q8N8P7 122 aa10.67□□□□□ -0.7
HCFC2-201ENST00000229330 RPL35AP18077 110 aaKnown RBP10.67□□□□□ -0.7
HCFC2-201ENST00000229330 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
HCFC2-201ENST00000229330 ARFGEF3Q5TH69 2177 aa10.67□□□□□ -0.7
HCFC2-201ENST00000229330 ZGRF1Q86YA3 2104 aa10.67□□□□□ -0.7
HCFC2-201ENST00000229330 EIF4EBP1Q13541 118 aaPredicted RBP10.67□□□□□ -0.7
HCFC2-201ENST00000229330 NPBQ8NG41 125 aa10.67□□□□□ -0.7
HCFC2-201ENST00000229330 IGFBPL1Q8WX77 278 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms