RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 SERF1AO75920 110 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
TVP23C-201ENST00000225576 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 LINC00310P59036 64 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 RBMY1FQ15415 496 aaKnown RBP12.33□□□□□ -0.44
TVP23C-201ENST00000225576 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 WFDC9Q8NEX5 89 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 HIST1H2BLQ99880 126 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 MCRIP2Q9BUT9 160 aaKnown RBP12.33□□□□□ -0.44
TVP23C-201ENST00000225576 ZNF747Q9BV97 191 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 TIMM8BQ9Y5J9 83 aaPredicted RBP12.33□□□□□ -0.44
TVP23C-201ENST00000225576 AGRNO00468 2067 aa12.33□□□□□ -0.44
TVP23C-201ENST00000225576 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 NXPH4O95158 308 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 NUTF2P61970 127 aaKnown RBP12.32□□□□□ -0.44
TVP23C-201ENST00000225576 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
TVP23C-201ENST00000225576 PRIMA1Q86XR5 153 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 Q8N1Y9 231 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 RNF185Q96GF1 192 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 LINC00467Q9BRT7 94 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 TRGV11A0A075B6L2 103 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 FABP4P15090 132 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 RAB4AP20338 218 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 TMEM18Q96B42 140 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 C9orf85Q96MD7 179 aa12.32□□□□□ -0.44
TVP23C-201ENST00000225576 M0R381 172 aa12.31□□□□□ -0.44
TVP23C-201ENST00000225576 INSP01308 110 aa12.31□□□□□ -0.44
TVP23C-201ENST00000225576 EVI2AP22794 236 aa12.31□□□□□ -0.44
TVP23C-201ENST00000225576 IQCJQ1A5X6 159 aa12.31□□□□□ -0.44
TVP23C-201ENST00000225576 ORMDL3Q8N138 153 aa12.31□□□□□ -0.44
TVP23C-201ENST00000225576 SPATA3Q8NHX4 192 aa12.31□□□□□ -0.44
TVP23C-201ENST00000225576 D6R8Y8 96 aa12.3□□□□□ -0.44
TVP23C-201ENST00000225576 PPBPP02775 128 aa12.3□□□□□ -0.44
TVP23C-201ENST00000225576 RCHY1Q96PM5 261 aa12.3□□□□□ -0.44
TVP23C-201ENST00000225576 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
TVP23C-201ENST00000225576 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
TVP23C-201ENST00000225576 COL6A5A8TX70 2615 aa12.29□□□□□ -0.44
TVP23C-201ENST00000225576 CBY3A6NI87 242 aa12.28□□□□□ -0.44
TVP23C-201ENST00000225576 SPRY2O43597 315 aa12.28□□□□□ -0.44
TVP23C-201ENST00000225576 CKS2P33552 79 aa12.28□□□□□ -0.44
TVP23C-201ENST00000225576 OR10D4PQ8NGN7 298 aa12.28□□□□□ -0.44
TVP23C-201ENST00000225576 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
TVP23C-201ENST00000225576 NIT1Q86X76 327 aa12.27□□□□□ -0.44
TVP23C-201ENST00000225576 LINC01587Q99440 93 aa12.27□□□□□ -0.44
TVP23C-201ENST00000225576 WFDC10AQ9H1F0 79 aa12.27□□□□□ -0.44
TVP23C-201ENST00000225576 XCL2Q9UBD3 114 aa12.27□□□□□ -0.44
TVP23C-201ENST00000225576 LAMTOR2Q9Y2Q5 125 aa12.27□□□□□ -0.44
TVP23C-201ENST00000225576 ATRQ13535 2644 aa12.27□□□□□ -0.44
TVP23C-201ENST00000225576 WIPF1O43516 503 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 MORN3Q6PF18 240 aaPredicted RBP12.27□□□□□ -0.45
TVP23C-201ENST00000225576 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 C3orf56Q8N813 242 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 TMEM158Q8WZ71 300 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 CHCHD1Q96BP2 118 aaKnown RBP12.27□□□□□ -0.45
TVP23C-201ENST00000225576 AP1S3Q96PC3 154 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
TVP23C-201ENST00000225576 STAB1Q9NY15 2570 aa12.26□□□□□ -0.45
TVP23C-201ENST00000225576 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
TVP23C-201ENST00000225576 LINC00614P0C842 121 aa12.25□□□□□ -0.45
TVP23C-201ENST00000225576 C1orf158Q8N1D5 194 aa12.25□□□□□ -0.45
TVP23C-201ENST00000225576 MRAP2Q96G30 205 aa12.25□□□□□ -0.45
TVP23C-201ENST00000225576 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
TVP23C-201ENST00000225576 SMKR1H3BMG3 65 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 HSBP1O75506 76 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
TVP23C-201ENST00000225576 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 HTN1P15515 57 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 RNASEKQ6P5S7 137 aaKnown RBP12.24□□□□□ -0.45
TVP23C-201ENST00000225576 C12orf54Q6X4T0 127 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 LINC00518Q8N0U6 118 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
TVP23C-201ENST00000225576 POM121L12Q8N7R1 296 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 C1QTNF4Q9BXJ3 329 aa12.24□□□□□ -0.45
TVP23C-201ENST00000225576 NCR2O95944 276 aa12.23□□□□□ -0.45
TVP23C-201ENST00000225576 NPYP01303 97 aa12.23□□□□□ -0.45
TVP23C-201ENST00000225576 ZNF415Q09FC8 603 aa12.23□□□□□ -0.45
TVP23C-201ENST00000225576 DEFB125Q8N687 156 aa12.23□□□□□ -0.45
TVP23C-201ENST00000225576 PTH2Q96A98 100 aa12.23□□□□□ -0.45
TVP23C-201ENST00000225576 KIF25-AS1Q9Y6Z4 181 aa12.23□□□□□ -0.45
TVP23C-201ENST00000225576 IGLL1P15814 213 aa12.22□□□□□ -0.45
TVP23C-201ENST00000225576 RPL35AP18077 110 aaKnown RBP12.22□□□□□ -0.45
TVP23C-201ENST00000225576 AMTP48728 403 aa12.22□□□□□ -0.45
TVP23C-201ENST00000225576 PIK3CD-AS1Q5SR53 167 aa12.22□□□□□ -0.45
TVP23C-201ENST00000225576 PRSS3P2Q8NHM4 247 aa12.22□□□□□ -0.45
TVP23C-201ENST00000225576 TMEM208Q9BTX3 173 aa12.22□□□□□ -0.45
TVP23C-201ENST00000225576 GSN-AS1Q9NRJ2 163 aa12.22□□□□□ -0.45
TVP23C-201ENST00000225576 FBN1P35555 2871 aaKnown RBP12.22□□□□□ -0.45
TVP23C-201ENST00000225576 GAS8-AS1O95177 125 aa12.21□□□□□ -0.45
TVP23C-201ENST00000225576 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
TVP23C-201ENST00000225576 SMIM17P0DL12 118 aa12.21□□□□□ -0.45
TVP23C-201ENST00000225576 LINC00315P59091 139 aa12.21□□□□□ -0.45
TVP23C-201ENST00000225576 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
TVP23C-201ENST00000225576 MDFIQ99750 246 aa12.21□□□□□ -0.45
TVP23C-201ENST00000225576 PMCHP20382 165 aa12.21□□□□□ -0.46
TVP23C-201ENST00000225576 ZNF876PQ49A33 203 aa12.21□□□□□ -0.46
TVP23C-201ENST00000225576 SPXQ9BT56 116 aa12.21□□□□□ -0.46
TVP23C-201ENST00000225576 MAP1LC3AQ9H492 121 aa12.21□□□□□ -0.46
TVP23C-201ENST00000225576 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms