RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 FOXE3Q13461 319 aa18.87■□□□□ 0.61
RUNDC3A-201ENST00000225441 SAMD13Q5VXD3 122 aa18.87■□□□□ 0.61
RUNDC3A-201ENST00000225441 GTF2H5Q6ZYL4 71 aa18.87■□□□□ 0.61
RUNDC3A-201ENST00000225441 ZNF580Q9UK33 172 aa18.87■□□□□ 0.61
RUNDC3A-201ENST00000225441 NOTCH2Q04721 2471 aa18.87■□□□□ 0.61
RUNDC3A-201ENST00000225441 GATA1P15976 413 aaPredicted RBP18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 CDKN1BP46527 198 aa18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 Q6YL49 198 aa18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 ZFAND2AQ8N6M9 145 aa18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 RNASE8Q8TDE3 154 aaKnown RBP18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 FAM19A4Q96LR4 140 aa18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 C20orf78Q9BR46 151 aa18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 A0A0G2JLM5 398 aa18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 C20orf173Q96LM9 149 aa18.86■□□□□ 0.61
RUNDC3A-201ENST00000225441 TRAV8-6A0A0B4J262 113 aa18.85■□□□□ 0.61
RUNDC3A-201ENST00000225441 PPP1R17O96001 155 aa18.85■□□□□ 0.61
RUNDC3A-201ENST00000225441 RBX1P62877 108 aa18.85■□□□□ 0.61
RUNDC3A-201ENST00000225441 UFC1Q9Y3C8 167 aa18.85■□□□□ 0.61
RUNDC3A-201ENST00000225441 M0R381 172 aa18.84■□□□□ 0.61
RUNDC3A-201ENST00000225441 ORMDL2Q53FV1 153 aa18.84■□□□□ 0.61
RUNDC3A-201ENST00000225441 GPHB5Q86YW7 130 aa18.84■□□□□ 0.61
RUNDC3A-201ENST00000225441 PCP2Q8IVA1 136 aa18.84■□□□□ 0.61
RUNDC3A-201ENST00000225441 TRAV12-1A0A0B4J245 112 aa18.84■□□□□ 0.61
RUNDC3A-201ENST00000225441 ASIPP42127 132 aa18.83■□□□□ 0.6
RUNDC3A-201ENST00000225441 WFDC3Q8IUB2 231 aa18.83■□□□□ 0.6
RUNDC3A-201ENST00000225441 SMIM2Q9BVW6 85 aa18.83■□□□□ 0.6
RUNDC3A-201ENST00000225441 A0A087WX48 190 aa18.82■□□□□ 0.6
RUNDC3A-201ENST00000225441 H3BVH4 76 aa18.82■□□□□ 0.6
RUNDC3A-201ENST00000225441 PLNP26678 52 aa18.82■□□□□ 0.6
RUNDC3A-201ENST00000225441 DPH3P1Q9H4G8 78 aa18.82■□□□□ 0.6
RUNDC3A-201ENST00000225441 GAGE10A6NGK3 116 aa18.81■□□□□ 0.6
RUNDC3A-201ENST00000225441 PRR9Q5T870 116 aa18.81■□□□□ 0.6
RUNDC3A-201ENST00000225441 UNQ9165/PRO28630Q6UXU0 137 aa18.81■□□□□ 0.6
RUNDC3A-201ENST00000225441 OTOGQ6ZRI0 2925 aa18.81■□□□□ 0.6
RUNDC3A-201ENST00000225441 SMR3AQ99954 134 aa18.81■□□□□ 0.6
RUNDC3A-201ENST00000225441 VPREB3Q9UKI3 123 aa18.81■□□□□ 0.6
RUNDC3A-201ENST00000225441 K7EMT4 169 aa18.8■□□□□ 0.6
RUNDC3A-201ENST00000225441 CST9LQ9H4G1 147 aa18.8■□□□□ 0.6
RUNDC3A-201ENST00000225441 TMEM160Q9NX00 188 aa18.8■□□□□ 0.6
RUNDC3A-201ENST00000225441 HOXA3O43365 443 aaPredicted RBP18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 IGLV1-40P01703 118 aa18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 UFSP1Q6NVU6 142 aa18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 TLN2Q9Y4G6 2542 aa18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 ACANP16112 2415 aa18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 TAL2Q16559 108 aa18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 POM121L12Q8N7R1 296 aa18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 LINC00527Q9UJ94 153 aa18.79■□□□□ 0.6
RUNDC3A-201ENST00000225441 LINC01549A6NIU2 74 aa18.78■□□□□ 0.6
RUNDC3A-201ENST00000225441 S100A4P26447 101 aaKnown RBP18.78■□□□□ 0.6
RUNDC3A-201ENST00000225441 GAGE12BA1L429 117 aa18.77■□□□□ 0.6
RUNDC3A-201ENST00000225441 LY6G6DO95868 133 aa18.77■□□□□ 0.6
RUNDC3A-201ENST00000225441 TRBV12-3P01733 135 aa18.77■□□□□ 0.6
RUNDC3A-201ENST00000225441 SUMO2P61956 95 aaKnown RBP18.77■□□□□ 0.6
RUNDC3A-201ENST00000225441 BLCAPP62952 87 aa18.77■□□□□ 0.6
RUNDC3A-201ENST00000225441 ZC2HC1BQ5TFG8 222 aa18.77■□□□□ 0.6
RUNDC3A-201ENST00000225441 ERASQ7Z444 233 aa18.77■□□□□ 0.6
RUNDC3A-201ENST00000225441 NXPH4O95158 308 aa18.77■□□□□ 0.59
RUNDC3A-201ENST00000225441 PHLDA3Q9Y5J5 127 aa18.77■□□□□ 0.59
RUNDC3A-201ENST00000225441 H7C1H1 209 aa18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 K7EP34 96 aa18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 SMIM13P0DJ93 91 aa18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 RPL32P62910 135 aaKnown RBP18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 OCIAD2Q56VL3 154 aa18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 OR5A1Q8NGJ0 315 aa18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 TOMM6Q96B49 74 aa18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 DAZ1Q9NQZ3 744 aaKnown RBP18.76■□□□□ 0.59
RUNDC3A-201ENST00000225441 MXRA5Q9NR99 2828 aa18.75■□□□□ 0.59
RUNDC3A-201ENST00000225441 IGKV2D-26A0A0A0MRZ7 120 aa18.75■□□□□ 0.59
RUNDC3A-201ENST00000225441 TRAV26-2A0A0B4J265 109 aa18.75■□□□□ 0.59
RUNDC3A-201ENST00000225441 CHAC1Q9BUX1 264 aa18.75■□□□□ 0.59
RUNDC3A-201ENST00000225441 TM2D2Q9BX73 214 aa18.75■□□□□ 0.59
RUNDC3A-201ENST00000225441 MRPL35Q9NZE8 188 aaKnown RBP18.75■□□□□ 0.59
RUNDC3A-201ENST00000225441 PF4V1P10720 104 aa18.74■□□□□ 0.59
RUNDC3A-201ENST00000225441 ID1P41134 155 aa18.74■□□□□ 0.59
RUNDC3A-201ENST00000225441 RHPN1-AS1Q9BWJ2 59 aa18.74■□□□□ 0.59
RUNDC3A-201ENST00000225441 F8VRH5 84 aa18.74■□□□□ 0.59
RUNDC3A-201ENST00000225441 LINC01619G3V211 115 aa18.74■□□□□ 0.59
RUNDC3A-201ENST00000225441 CFHR3Q02985 330 aa18.74■□□□□ 0.59
RUNDC3A-201ENST00000225441 ANXA2RQ3ZCQ2 193 aa18.74■□□□□ 0.59
RUNDC3A-201ENST00000225441 TRBV25-1A0A075B6N4 114 aa18.73■□□□□ 0.59
RUNDC3A-201ENST00000225441 Q6ZQT7 251 aa18.73■□□□□ 0.59
RUNDC3A-201ENST00000225441 Q6ZS46 218 aa18.73■□□□□ 0.59
RUNDC3A-201ENST00000225441 TMEM86BQ8N661 226 aa18.73■□□□□ 0.59
RUNDC3A-201ENST00000225441 RASL10AQ92737 203 aa18.73■□□□□ 0.59
RUNDC3A-201ENST00000225441 TMEM89A2RUT3 159 aa18.72■□□□□ 0.59
RUNDC3A-201ENST00000225441 H3BUT2 72 aa18.72■□□□□ 0.59
RUNDC3A-201ENST00000225441 K7ERU9 68 aa18.72■□□□□ 0.59
RUNDC3A-201ENST00000225441 GTSCR1Q86UQ5 136 aa18.72■□□□□ 0.59
RUNDC3A-201ENST00000225441 ZFHX3Q15911 3703 aa18.71■□□□□ 0.59
RUNDC3A-201ENST00000225441 A0A1W2PPM0 123 aa18.71■□□□□ 0.59
RUNDC3A-201ENST00000225441 RNASE4P34096 147 aaKnown RBP18.71■□□□□ 0.59
RUNDC3A-201ENST00000225441 SCGB2A2Q13296 93 aa18.71■□□□□ 0.59
RUNDC3A-201ENST00000225441 SONP18583 2426 aaKnown RBP18.7■□□□□ 0.58
RUNDC3A-201ENST00000225441 KLLNB2CW77 178 aa18.7■□□□□ 0.58
RUNDC3A-201ENST00000225441 ODF3Q96PU9 254 aa18.7■□□□□ 0.58
RUNDC3A-201ENST00000225441 SCGB3A1Q96QR1 104 aa18.7■□□□□ 0.58
RUNDC3A-201ENST00000225441 KLK15Q9H2R5 256 aa18.7■□□□□ 0.58
RUNDC3A-201ENST00000225441 RPL11P62913 178 aaKnown RBP18.7■□□□□ 0.58
RUNDC3A-201ENST00000225441 IGHV4OR15-8A0A075B7B6 117 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms