RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TRAV12-3A0A0B4J271 114 aa11.02□□□□□ -0.64
CNOT3-201ENST00000221232 HSD52Q0P140 79 aa11.02□□□□□ -0.64
CNOT3-201ENST00000221232 GAGE12BA1L429 117 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 A6NDN8 102 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 ZNF688P0C7X2 276 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 DEFB112Q30KQ8 113 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 OR9G4Q8NGQ1 327 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 A0A087WWL8 130 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 PRB1P04280 392 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 FXYD2P54710 66 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 SMIM2Q9BVW6 85 aa11.02□□□□□ -0.65
CNOT3-201ENST00000221232 DAZ1Q9NQZ3 744 aaKnown RBP11.02□□□□□ -0.65
CNOT3-201ENST00000221232 ATP5LO75964 103 aa11.01□□□□□ -0.65
CNOT3-201ENST00000221232 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
CNOT3-201ENST00000221232 A0A0G2JLM5 398 aa11.01□□□□□ -0.65
CNOT3-201ENST00000221232 LINC01546A6NGU7 62 aa11.01□□□□□ -0.65
CNOT3-201ENST00000221232 CRIP2P52943 208 aaPredicted RBP11.01□□□□□ -0.65
CNOT3-201ENST00000221232 SUMO2P61956 95 aaKnown RBP11.01□□□□□ -0.65
CNOT3-201ENST00000221232 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
CNOT3-201ENST00000221232 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
CNOT3-201ENST00000221232 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11□□□□□ -0.65
CNOT3-201ENST00000221232 RNASE3P12724 160 aaKnown RBP11□□□□□ -0.65
CNOT3-201ENST00000221232 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
CNOT3-201ENST00000221232 SMPXQ9UHP9 88 aa11□□□□□ -0.65
CNOT3-201ENST00000221232 TRBV25-1A0A075B6N4 114 aa11□□□□□ -0.65
CNOT3-201ENST00000221232 IGHV4-4A0A075B6R2 117 aa11□□□□□ -0.65
CNOT3-201ENST00000221232 F5H697 171 aa11□□□□□ -0.65
CNOT3-201ENST00000221232 DPH3P1Q9H4G8 78 aa11□□□□□ -0.65
CNOT3-201ENST00000221232 C9orf118A6NHY6 69 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 EMP1P54849 157 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 PSMG4Q5JS54 123 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 AGRNO00468 2067 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 B4DSR2 109 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 H3BRM9 83 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 TGFAP01135 160 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 CD7P09564 240 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 FAM74A4Q5TZK3 123 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 SAP30O75446 220 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
CNOT3-201ENST00000221232 LRRK2Q5S007 2527 aa10.98□□□□□ -0.65
CNOT3-201ENST00000221232 A0A087WX48 190 aa10.98□□□□□ -0.65
CNOT3-201ENST00000221232 FAM159AQ6UWV7 190 aa10.98□□□□□ -0.65
CNOT3-201ENST00000221232 LENEPQ9Y5L5 61 aa10.98□□□□□ -0.65
CNOT3-201ENST00000221232 FBN2P35556 2912 aa10.98□□□□□ -0.65
CNOT3-201ENST00000221232 NDUFS8O00217 210 aa10.98□□□□□ -0.65
CNOT3-201ENST00000221232 HTN1P15515 57 aa10.98□□□□□ -0.65
CNOT3-201ENST00000221232 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
CNOT3-201ENST00000221232 ABCA12Q86UK0 2595 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 SIVA1O15304 175 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 MUC4Q99102 2169 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 ZNF462Q96JM2 2506 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 PTPN13Q12923 2485 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 A6NJY4 79 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 SYNJ2BPP57105 145 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 C2orf66Q6UXQ4 117 aa10.97□□□□□ -0.65
CNOT3-201ENST00000221232 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
CNOT3-201ENST00000221232 SMIM13P0DJ93 91 aa10.96□□□□□ -0.66
CNOT3-201ENST00000221232 OCIAD2Q56VL3 154 aa10.96□□□□□ -0.66
CNOT3-201ENST00000221232 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
CNOT3-201ENST00000221232 TLN2Q9Y4G6 2542 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 H3BUA1 57 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 DCANP1Q8TF63 244 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 MDFICQ9P1T7 246 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 MXRA5Q9NR99 2828 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 RNF223E7ERA6 249 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
CNOT3-201ENST00000221232 H7C1H1 209 aa10.94□□□□□ -0.66
CNOT3-201ENST00000221232 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
CNOT3-201ENST00000221232 ID1P41134 155 aa10.94□□□□□ -0.66
CNOT3-201ENST00000221232 SPINK13Q1W4C9 94 aa10.94□□□□□ -0.66
CNOT3-201ENST00000221232 ORMDL2Q53FV1 153 aa10.94□□□□□ -0.66
CNOT3-201ENST00000221232 BEX4Q9NWD9 120 aaPredicted RBP10.94□□□□□ -0.66
CNOT3-201ENST00000221232 PSMB8P28062 276 aa10.94□□□□□ -0.66
CNOT3-201ENST00000221232 RPL39P62891 51 aaKnown RBP10.94□□□□□ -0.66
CNOT3-201ENST00000221232 CFHR3Q02985 330 aa10.94□□□□□ -0.66
CNOT3-201ENST00000221232 SAMD5Q5TGI4 173 aa10.94□□□□□ -0.66
CNOT3-201ENST00000221232 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 GTF2H5Q6ZYL4 71 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 A0A1W2PPM0 123 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 F8VRH5 84 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 PRM2P04554 102 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 BAALCQ8WXS3 180 aa10.93□□□□□ -0.66
CNOT3-201ENST00000221232 ZNF256Q9Y2P7 627 aaPredicted RBP10.93□□□□□ -0.66
CNOT3-201ENST00000221232 DEFB136Q30KP8 78 aa10.92□□□□□ -0.66
CNOT3-201ENST00000221232 CD300EQ496F6 205 aaPredicted RBP10.92□□□□□ -0.66
CNOT3-201ENST00000221232 SUMO4Q6EEV6 95 aa10.92□□□□□ -0.66
CNOT3-201ENST00000221232 CEND1Q8N111 149 aa10.92□□□□□ -0.66
CNOT3-201ENST00000221232 C20orf78Q9BR46 151 aa10.92□□□□□ -0.66
CNOT3-201ENST00000221232 KLHL30-AS1Q8NEE0 82 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 DUX3Q96PT4 197 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 CYSLTR1Q9Y271 337 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 NAV2Q8IVL1 2488 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 KLLNB2CW77 178 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 K7EP34 96 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms