RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GAGE12BA1L429 117 aa9.49□□□□□ -0.89
TM9SF4-201ENST00000217315 EPG5Q9HCE0 2579 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 ZNF493Q6ZR52 646 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 Q8N6K4 173 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 ZNF479Q96JC4 524 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 SCRT2Q9NQ03 307 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 LENEPQ9Y5L5 61 aa9.48□□□□□ -0.89
TM9SF4-201ENST00000217315 TRGV11A0A075B6L2 103 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 KNCNA6PVL3 124 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 TP53TG1Q9Y2A0 90 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 AKAP13Q12802 2813 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 CCL25O15444 150 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 TCTEX1D4Q5JR98 221 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 KLHL30-AS1Q8NEE0 82 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 MEGF9Q9H1U4 602 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 SDHAF1A6NFY7 115 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 IGHG2P01859 326 aa9.47□□□□□ -0.89
TM9SF4-201ENST00000217315 H3BUA1 57 aa9.46□□□□□ -0.89
TM9SF4-201ENST00000217315 IGF1P05019 195 aa9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 IGLC6P0CF74 106 aa9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 Q5PR19 223 aa9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 DEFB125Q8N687 156 aa9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 RRN3P1Q2M238 152 aa9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 Q8N976 141 aa9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 ZNF418Q8TF45 676 aaPredicted RBP9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 PRRC2AP48634 2157 aaKnown RBP9.46□□□□□ -0.9
TM9SF4-201ENST00000217315 IGKV3OR2-268A0A0C4DH90 116 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 A0A1B0GWB2 263 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 F8VRH5 84 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 CD28P10747 220 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 CDKN1BP46527 198 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 STHQ8IWL8 128 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 CENPEQ02224 2701 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 DEFB136Q30KP8 78 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 TEX29Q8N6K0 151 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 YAE1D1Q9NRH1 226 aa9.45□□□□□ -0.9
TM9SF4-201ENST00000217315 HOXA3O43365 443 aaPredicted RBP9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 SPATA12Q7Z6I5 190 aa9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 DOPEY1Q5JWR5 2465 aa9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 MRPS12O15235 138 aaKnown RBP9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 IGHV1OR15-1A0A075B7D0 117 aa9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 PRORYQ9H606 182 aa9.44□□□□□ -0.9
TM9SF4-201ENST00000217315 H3BRM9 83 aa9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 UBE2E2Q96LR5 201 aa9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 MAP1AP78559 2803 aaPredicted RBP9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 Q96MF0 132 aa9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 TRAV2A0A0B4J234 112 aa9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 K7ERJ3 54 aa9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 HOXD3P31249 432 aaPredicted RBP9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
TM9SF4-201ENST00000217315 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 A0A087WX48 190 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 C9orf118A6NHY6 69 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 CIDEAO60543 219 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 C20orf78Q9BR46 151 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 LOC400499M0QZD8 3231 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 A6NDX4 124 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
TM9SF4-201ENST00000217315 CRXO43186 299 aaPredicted RBP9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 RIPPLY3P57055 190 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 ADGRG4Q8IZF6 3080 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 TRBV25-1A0A075B6N4 114 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 UBE2L6O14933 153 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 K7EMI3 77 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 TAX1BP3O14907 124 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 PHLDA1Q8WV24 401 aaPredicted RBP9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 XCL2Q9UBD3 114 aa9.41□□□□□ -0.9
TM9SF4-201ENST00000217315 TRGV2A0A075B6R0 118 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 ELANEP08246 267 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 ODF1Q14990 250 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 C11orf21Q9P2W6 132 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 JMJD1CQ15652 2540 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 J3QLI3 93 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 JPT2Q9H910 190 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 Q6ZQT7 251 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 Q6ZS46 218 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 MTURNQ8N3F0 131 aa9.4□□□□□ -0.9
TM9SF4-201ENST00000217315 ACANP16112 2415 aa9.4□□□□□ -0.91
TM9SF4-201ENST00000217315 ZNF415Q09FC8 603 aa9.4□□□□□ -0.91
TM9SF4-201ENST00000217315 PMVKQ15126 192 aa9.4□□□□□ -0.91
TM9SF4-201ENST00000217315 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms