RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm5148Q8BGG2 154 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Harbi1Q8BR93 349 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Vstm2aQ8R0A6 236 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Mlst8Q9DCJ1 326 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 PpbpQ9EQI5 113 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Pxmp4Q9JJW0 212 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Trav6n-5A0A075B621 112 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Trav6-5A0A075B6B5 112 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Trbv3A0A0A6YYE2 117 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 H2al1jA2BFR3 109 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 C2cd4aE9Q861 334 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gm12830F6XVH0 157 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 RanP62827 216 aaKnown RBP11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Rhox10Q4TU83 196 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 5730522E02RikQ5SP45 163 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Oraov1Q8CH62 137 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Alkbh6Q8K2U2 238 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Igkv1-131A0A140T8M8 120 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Thap8E9Q695 213 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 3110021N24RikJ3QMN2 152 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gm21882J3QN86 361 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ascl2O35885 263 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Klk1b22P15948 259 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Rom1P32958 351 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 MymxQ2Q5T5 84 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Zfp420Q7TMN8 578 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr91Q7TRL3 312 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gpbar1Q80SS6 329 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Spsb4Q8R5B6 273 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gpr87Q99MT7 358 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ramp3Q9WUP1 147 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 AplnrQ9WV08 377 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Timm8a1Q9WVA2 97 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Cacna1gQ5SUF7 2381 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gm44596A0A0N4SVA0 210 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Degs1O09005 323 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gata2O09100 480 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 MyadmO35682 320 aaKnown RBP11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 EnsaP60840 121 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 MiaQ61865 130 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Dusp23Q6NT99 150 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gm10309Q8C648 119 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr1102Q8VES2 324 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Rer1Q9CQU3 196 aaKnown RBP11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Mrps36Q9CQX8 102 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Pip4p2Q9CZX7 257 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ccl28Q9JIL2 130 aa11.07□□□□□ -0.64
Nup88-201ENSMUST00000035283 Csmd1Q923L3 3564 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 BptfA2A654 3036 aaKnown RBP11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gm28171A0A087WQ19 227 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr1320A2AHM8 319 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Srsf6Q3TWW8 339 aaKnown RBP11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Prdx2Q61171 198 aaKnown RBP11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Cxxc4Q6NXI8 198 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 SriQ6P069 198 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr1178Q7TR20 323 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Rbm14Q8C2Q3 669 aaKnown RBP11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Rhbdd2Q8VEK2 361 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr513Q8VFZ3 309 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Znrf1Q91V17 227 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 H2afb1Q9CQ70 111 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ceacam11Q9D0Z8 303 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Mapk1ip1Q9D7G9 263 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Cep295Q8BQ48 2412 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 NacaP70670 2187 aaKnown RBP11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Hoxb2P0C1T1 354 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gabra2P26048 451 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 RhobP62746 196 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 MmdQ9CQY7 238 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Rnf125Q9D9R0 233 aa11.06□□□□□ -0.64
Nup88-201ENSMUST00000035283 Zfp976E9Q981 636 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Scgb2a2J3KMP9 96 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Agr2O88312 175 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Pdlim4P70271 330 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Cnep1r1Q3UJ81 125 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Arl14eplQ3UKZ7 152 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Wipf2Q6PEV3 440 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr822Q8VFU1 312 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr1258Q8VGN6 311 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 FibinQ9CQS3 217 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr959Q9EQ86 311 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Nubp1Q9R060 320 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 ArtnQ9Z0L2 224 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Zfhx4Q9JJN2 3550 aa11.05□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ighv1-19A0A0A6YWX0 117 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Igkv6-23A0A140T8N5 115 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 3110082J24RikF6Z6Z2 108 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Mtnd6P03925 172 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Cd59bP58019 129 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ubald1Q6P3B2 176 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr495Q8VF12 330 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 P2ry6Q9ERK9 328 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Tmem9bQ9JJR8 199 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Timm10bQ9WV96 100 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Trav17A0A075B655 113 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Gm14124A2AU83 715 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Spint5J3KMK8 105 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 P01804 111 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Evi2aP20934 223 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Bst1Q64277 311 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms