RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Ssty2Q149W4 227 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Cacna1aP97445 2368 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Trbv19A0A0B4J1H4 117 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Olfr779E9PUS9 130 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm6594J3QM43 95 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Zfp936Q3ULA8 456 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tmem255bQ5FW56 369 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Dmrtc2Q8CGW9 370 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Sh3bgrl3Q91VW3 93 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gatad1Q920S3 266 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Mfap4Q9D1H9 257 aa10.41□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 PkigO70139 76 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 SeleQ00690 612 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Saxo2Q8BQB6 394 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ripply2Q2WG76 128 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Tspan7Q62283 249 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Wdr82Q8BFQ4 313 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Rspo4Q8BJ73 228 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm9945Q8BNZ3 91 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Trav18A0A075B656 109 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 TracA0A075B662 137 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 TcraP01849 138 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Timp3P39876 211 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Plppr1Q8BFZ2 325 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Ifitm7G3X9Z2 141 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Sc5dO88822 299 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 NgfP01139 241 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Loxl2P58022 776 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Dlx6P70397 175 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Srsf6Q3TWW8 339 aaKnown RBP10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Anapc10Q8K2H6 185 aa10.4□□□□□ -0.74
Pcdhac1-201ENSMUST00000007584 Gm29644A0A087WPG2 191 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm45844A0A1B0GRQ2 137 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Q3U1D9 316 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Slc25a28Q8R0Z5 364 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Lyzl1Q9CPX3 148 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 ChtopQ9CY57 249 aaKnown RBP10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Ssbp2Q9CYZ8 361 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Prr30Q9D9B7 401 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Fbxw4Q9JMJ2 410 aa10.4□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Igkv4-91A0A075B5L2 119 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Trav4-2A0A075B638 110 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Ighv1-47A0A0A6YY41 117 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 4931422A03RikA2BHN9 113 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm12888Q3UW77 119 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Lax1Q8BHB3 407 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm29289A0A087WPY7 166 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm4064A0A087WR82 380 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 OdamA1E960 273 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm10352B2RWR6 380 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm21693J3QK27 380 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Rbmy1a1O35698 380 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Rpl27aP14115 148 aaKnown RBP10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Tmem158Q6F5E0 286 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Fbxl15Q91W61 300 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Rnf126Q91YL2 313 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Plxdc1Q91ZV7 500 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Ighv8-9A0A0G2JET1 119 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Rpl36-ps4A0A140T8U4 117 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Olfr1189A2AV11 306 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm9733Q1AN91 178 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Cox19Q8K0C8 92 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Sipa1l2Q80TE4 1722 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm45521A0A1B0GRK0 198 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Dcaf10A2AKB9 566 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Olfr1419Q7TQS2 343 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 MavsQ8VCF0 503 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Plpp2Q9DAX2 276 aa10.39□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Q0VG49 157 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Rs1Q9Z1L4 224 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm15093A2BI72 449 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm15097E9QA14 449 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Saa3P04918 122 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 TtrP07309 147 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Hoxd11P23813 323 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Rnd1Q8BLR7 232 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Prss58Q8BW11 241 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Lrrc25Q8K1T1 297 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Frrs1lB1AXV0 293 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gata2O09100 480 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Jpt2Q6PGH2 190 aaKnown RBP10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 OstcQ78XF5 149 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Mbnl2Q8C181 373 aaKnown RBP10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Sfxn3Q91V61 321 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Tspan2Q922J6 221 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Foxi3E0CZH3 425 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 BokO35425 213 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Ascl2O35885 263 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 GlulP15105 373 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Phxr1P15973 60 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 CampP51437 172 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Cd200r5Q8BTP3 270 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Wdr5bQ9D7H2 328 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 CklfQ9DAS1 152 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Cryba2Q9JJV1 197 aa10.38□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Lrrc26Q91W20 331 aa10.37□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Mgst3Q9CPU4 153 aa10.37□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Ppp1r27Q9D119 154 aa10.37□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm5089A1L3C8 106 aa10.37□□□□□ -0.75
Pcdhac1-201ENSMUST00000007584 Gm9857F7CXR1 130 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 184.3 ms