RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PDZD11Q5EBL8 140 aa9.28□□□□□ -0.92
CTSD-208ENST00000636843 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
CTSD-208ENST00000636843 HIST1H2BLQ99880 126 aa9.28□□□□□ -0.92
CTSD-208ENST00000636843 SLC50A1Q9BRV3 221 aa9.28□□□□□ -0.92
CTSD-208ENST00000636843 CRISP2P16562 243 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 CMC4P56277 68 aaPredicted RBP9.27□□□□□ -0.93
CTSD-208ENST00000636843 S100A12P80511 92 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
CTSD-208ENST00000636843 TMEM18Q96B42 140 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 PACRGQ96M98 296 aaPredicted RBP9.27□□□□□ -0.93
CTSD-208ENST00000636843 NEU1Q99519 415 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 U3KQE9 123 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 KMT2AQ03164 3969 aa9.27□□□□□ -0.93
CTSD-208ENST00000636843 HIGD1CA8MV81 97 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 M0R3E3 92 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 SPINK4O60575 86 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 RPL35AP18077 110 aaKnown RBP9.26□□□□□ -0.93
CTSD-208ENST00000636843 Q0VG73 95 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 C16orf54Q6UWD8 224 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 SMPXQ9UHP9 88 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 ZNF207O43670 478 aaKnown RBP9.26□□□□□ -0.93
CTSD-208ENST00000636843 AMBPP02760 352 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 CT45A10P0DMU9 189 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 RAB4BP61018 213 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 SAPCD1Q5SSQ6 148 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 COX8CQ7Z4L0 72 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 NIT2Q9NQR4 276 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 CLEC5AQ9NY25 188 aa9.26□□□□□ -0.93
CTSD-208ENST00000636843 IGHV3OR16-8A0A075B7F1 116 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 CHEK1O14757 476 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 APCSP02743 223 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 ESDP10768 282 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 PYY3Q5JQD4 70 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 OR10J3Q5JRS4 329 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 PHLDA1Q8WV24 401 aaPredicted RBP9.25□□□□□ -0.93
CTSD-208ENST00000636843 MRPL53Q96EL3 112 aaKnown RBP9.25□□□□□ -0.93
CTSD-208ENST00000636843 ZC2HC1AQ96GY0 325 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
CTSD-208ENST00000636843 IGHV7-4-1A0A0J9YVY3 117 aa9.24□□□□□ -0.93
CTSD-208ENST00000636843 A0A1B0GXF2 115 aa9.24□□□□□ -0.93
CTSD-208ENST00000636843 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
CTSD-208ENST00000636843 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
CTSD-208ENST00000636843 LGALS9CQ6DKI2 356 aa9.24□□□□□ -0.93
CTSD-208ENST00000636843 OR2D3Q8NGH3 330 aa9.24□□□□□ -0.93
CTSD-208ENST00000636843 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
CTSD-208ENST00000636843 FRAS1Q86XX4 4008 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 GRIFINA4D1Z8 144 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 PCP4L1A6NKN8 68 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 HBBP68871 147 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 Q6AWC8 147 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 TCF24Q7RTU0 167 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 APRG1Q8IVJ8 170 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 NDFIP1Q9BT67 221 aa9.23□□□□□ -0.93
CTSD-208ENST00000636843 IGKV2-40A0A087WW87 121 aaPredicted RBP9.22□□□□□ -0.93
CTSD-208ENST00000636843 IGKV2D-40P01614 121 aaPredicted RBP9.22□□□□□ -0.93
CTSD-208ENST00000636843 PAFAH1B2P68402 229 aa9.22□□□□□ -0.93
CTSD-208ENST00000636843 BAGE3Q86Y29 109 aa9.22□□□□□ -0.93
CTSD-208ENST00000636843 TMEM256Q8N2U0 113 aa9.22□□□□□ -0.93
CTSD-208ENST00000636843 GTSF1Q8WW33 167 aa9.22□□□□□ -0.93
CTSD-208ENST00000636843 A0A1W2PS18 150 aa9.21□□□□□ -0.93
CTSD-208ENST00000636843 APOHP02749 345 aaPredicted RBP9.21□□□□□ -0.93
CTSD-208ENST00000636843 TFPI2P48307 235 aa9.21□□□□□ -0.93
CTSD-208ENST00000636843 JOSD1Q15040 202 aaPredicted RBP9.21□□□□□ -0.93
CTSD-208ENST00000636843 FAM162BQ5T6X4 162 aa9.21□□□□□ -0.93
CTSD-208ENST00000636843 GLMPQ8WWB7 406 aa9.21□□□□□ -0.93
CTSD-208ENST00000636843 PGLYRP4Q96LB8 373 aa9.21□□□□□ -0.93
CTSD-208ENST00000636843 C8orf49Q96NF6 230 aa9.21□□□□□ -0.93
CTSD-208ENST00000636843 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.93
CTSD-208ENST00000636843 TP53TG3Q9ULZ0 132 aa9.21□□□□□ -0.93
CTSD-208ENST00000636843 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.94
CTSD-208ENST00000636843 IGHV3-66A0A0C4DH42 116 aa9.21□□□□□ -0.94
CTSD-208ENST00000636843 A0A1B0GW15 77 aa9.21□□□□□ -0.94
CTSD-208ENST00000636843 SRIP30626 198 aa9.21□□□□□ -0.94
CTSD-208ENST00000636843 CRIP1P50238 77 aa9.21□□□□□ -0.94
CTSD-208ENST00000636843 RPS20P60866 119 aaKnown RBP9.21□□□□□ -0.94
CTSD-208ENST00000636843 SLAQ13239 276 aa9.21□□□□□ -0.94
CTSD-208ENST00000636843 ZNF124Q15973 351 aa9.21□□□□□ -0.94
CTSD-208ENST00000636843 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 SERF1AO75920 110 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 HLA-DMBP28068 263 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 CAMPP49913 170 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 RIGQ13278 110 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 KIAA1644Q3SXP7 199 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 OR11H2Q8NH07 326 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 C11orf45Q8TAV5 145 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 VGLL1Q99990 258 aa9.2□□□□□ -0.94
CTSD-208ENST00000636843 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 IGHV3OR16-13A0A075B7E8 117 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 IGHV3-74A0A0B4J1X5 117 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 A0A1B0GUT8 65 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 TMEM189A5PLL7 270 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 ZNF705FA8MVS1 300 aaPredicted RBP9.19□□□□□ -0.94
CTSD-208ENST00000636843 SH2D1AO60880 128 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 TCTAP57738 103 aa9.19□□□□□ -0.94
CTSD-208ENST00000636843 NANOS2P60321 138 aaKnown RBP9.19□□□□□ -0.94
CTSD-208ENST00000636843 IGFL4Q6B9Z1 124 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms