RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 GCGP01275 180 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 IGKV3-20P01619 116 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 DEFB1P60022 68 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 RPS20P60866 119 aaKnown RBP4.88□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF674Q2M3X9 581 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 CT83Q5H943 113 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 PIK3CD-AS1Q5SR53 167 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 DNLZQ5SXM8 178 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 FAM162BQ5T6X4 162 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 FAM159AQ6UWV7 190 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 FAM231DQ6ZW35 169 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 SBSPONQ8IVN8 264 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 TMEM263Q8WUH6 116 aaKnown RBP4.88□□□□□ -1.63
UPF3B-205ENST00000636792 C16orf74Q96GX8 76 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 TMEM208Q9BTX3 173 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 DERL1Q9BUN8 251 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 SEC11CQ9BY50 192 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 XCL2Q9UBD3 114 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 NAT8Q9UHE5 227 aa4.88□□□□□ -1.63
UPF3B-205ENST00000636792 TRAV34A0A0B4J273 112 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 PRB2P02812 416 aaPredicted RBP4.87□□□□□ -1.63
UPF3B-205ENST00000636792 SFTA3P0C7M3 94 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 BTN1A1Q13410 526 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 TMEM241Q24JQ0 296 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 RRN3P1Q2M238 152 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 DEFB135Q30KP9 77 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 COMMD7Q86VX2 200 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 C1orf158Q8N1D5 194 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 PCNPQ8WW12 178 aaKnown RBP4.87□□□□□ -1.63
UPF3B-205ENST00000636792 TVP23CQ96ET8 276 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 OVOL2Q9BRP0 275 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 SDF2L1Q9HCN8 221 aa4.87□□□□□ -1.63
UPF3B-205ENST00000636792 IGHV1OR15-1A0A075B7D0 117 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 TMEM218A2RU14 115 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 C19orf71A6NCJ1 209 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 FAM231BA6NCW3 169 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 LYRM9A8MSI8 78 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 B4DEV8 164 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 KRBOX1C9JBD0 128 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 PPP1R2P9O14990 202 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 IGLV2-8P01709 118 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 SLPIP03973 132 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 RNASE4P34096 147 aaKnown RBP4.86□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF415Q09FC8 603 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 DAZ2Q13117 558 aaKnown RBP4.86□□□□□ -1.63
UPF3B-205ENST00000636792 LINC01551Q86U37 167 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 Q8NAQ8 132 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
UPF3B-205ENST00000636792 PTH2Q96A98 100 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 DAZAP1Q96EP5 407 aaKnown RBP4.86□□□□□ -1.63
UPF3B-205ENST00000636792 ZC2HC1AQ96GY0 325 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 SPXQ9BT56 116 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 CARHSP1Q9Y2V2 147 aaKnown RBP4.86□□□□□ -1.63
UPF3B-205ENST00000636792 X6R8D5 127 aa4.86□□□□□ -1.63
UPF3B-205ENST00000636792 TRAV12-2A0A075B6T6 113 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 TRAV12-3A0A0B4J271 114 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 A0A1W2PPQ1 181 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 CIDEAO60543 219 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 SH2D1AO60880 128 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 P01737 135 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 MGST1P10620 155 aaKnown RBP4.85□□□□□ -1.63
UPF3B-205ENST00000636792 TCL1AP56279 114 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 LGALS9BQ3B8N2 356 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 C10orf91Q5T1B1 145 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 PRR9Q5T870 116 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 C15orf54Q8N8G6 183 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 OR11H2Q8NH07 326 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 C18orf15Q96N68 181 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 LINC01587Q99440 93 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 GFRA4Q9GZZ7 299 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 OSTCQ9NRP0 149 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 IL36BQ9NZH7 164 aa4.85□□□□□ -1.63
UPF3B-205ENST00000636792 TIMM8BQ9Y5J9 83 aaPredicted RBP4.85□□□□□ -1.63
UPF3B-205ENST00000636792 CBY3A6NI87 242 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 SNURFLB1AK76 121 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 C9JQL5 133 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 F8W036 122 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 K7EN84 100 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 RBMY1A1P0DJD3 496 aaKnown RBP4.84□□□□□ -1.63
UPF3B-205ENST00000636792 RBMY1CP0DJD4 496 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 ASIPP42127 132 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 ZNF80P51504 273 aaPredicted RBP4.84□□□□□ -1.63
UPF3B-205ENST00000636792 CEBPGP53567 150 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 FXYD7P58549 80 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 RPL23P62829 140 aaKnown RBP4.84□□□□□ -1.63
UPF3B-205ENST00000636792 RBMY1FQ15415 496 aaKnown RBP4.84□□□□□ -1.63
UPF3B-205ENST00000636792 OCC1Q8TAD7 63 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 ISOC2Q96AB3 205 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 ANAPC16Q96DE5 110 aa4.84□□□□□ -1.63
UPF3B-205ENST00000636792 IGHV3OR16-12A0A075B7B8 117 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 IGKV3D-20A0A0C4DH25 116 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 IGHV4-28A0A0C4DH34 117 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 A8MWL6 223 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 F2Z2F3 143 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 J3KRW8 73 aa4.83□□□□□ -1.64
UPF3B-205ENST00000636792 SNAI2O43623 268 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms