RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 DEFB109BQ30KR1 87 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 CCSMST1Q4G0I0 132 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 TEX29Q8N6K0 151 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 PPP1R1CQ8WVI7 109 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 CARD19Q96LW7 228 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 SH3BGRL3Q9H299 93 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 IL20Q9NYY1 176 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 MED11Q9P086 117 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 PIEZO2Q9H5I5 2752 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 SPTBN2O15020 2390 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 TANC2Q9HCD6 1990 aa-0.61□□□□□ -2.51
SRP54-214ENST00000630962 PKDREJQ9NTG1 2253 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 CHD6Q8TD26 2715 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 APC2O95996 2303 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 TRAV17A0A0B4J275 112 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 APOC1P02654 83 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 TFF1P04155 84 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 IFNA6P05013 189 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 SDC2P34741 201 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 POLR2JP52435 117 aaKnown RBP-0.62□□□□□ -2.51
SRP54-214ENST00000630962 REEP5Q00765 189 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 EMX2Q04743 252 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 FADDQ13158 208 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 NUP35Q8NFH5 326 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 OR13C6PQ8NH95 151 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 SMIM11BQ8TCY0 68 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 LRTM1Q9HBL6 345 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 BET1LQ9NYM9 111 aa-0.62□□□□□ -2.51
SRP54-214ENST00000630962 TRAPPC8Q9Y2L5 1435 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 MAP1BP46821 2468 aaKnown RBP-0.63□□□□□ -2.51
SRP54-214ENST00000630962 VIRMAQ69YN4 1812 aaKnown RBP-0.63□□□□□ -2.51
SRP54-214ENST00000630962 TRAV12-2A0A075B6T6 113 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.63□□□□□ -2.51
SRP54-214ENST00000630962 TRBV10-1A0A0K0K1A3 114 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 TEX49A0A1B0GTD5 131 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 GABARAPH6UMI1 98 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 M0R3E3 92 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 MFSD11O43934 449 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 PRM1P04553 51 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 SLC25A4P12235 298 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 ELOF1P60002 83 aaKnown RBP-0.63□□□□□ -2.51
SRP54-214ENST00000630962 BLCAPP62952 87 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 BASP1P80723 227 aaKnown RBP-0.63□□□□□ -2.51
SRP54-214ENST00000630962 DYDC1Q8WWB3 177 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 AP3S1Q92572 193 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 GINS3Q9BRX5 216 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 PARVGQ9HBI0 331 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 VWFP04275 2813 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 ANKRD31Q8N7Z5 1873 aa-0.63□□□□□ -2.51
SRP54-214ENST00000630962 TECPR2O15040 1411 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 CAMSAP1Q5T5Y3 1602 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 TCOF1Q13428 1488 aaKnown RBP-0.64□□□□□ -2.51
SRP54-214ENST00000630962 TRDV1A0A1B0GX56 115 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 CTXN2P0C2S0 81 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 COX4I1P13073 169 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 CKS2P33552 79 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 SPAG11BQ08648 103 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 WFDC2Q14508 124 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 TMED2Q15363 201 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 LINC00305Q7Z4B0 112 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 OR51A4Q8NGJ6 313 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 LAMTOR3Q9UHA4 124 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 PRO0255Q9UI72 69 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 HELZP42694 1942 aaKnown RBP-0.64□□□□□ -2.51
SRP54-214ENST00000630962 NHSL1Q5SYE7 1610 aa-0.64□□□□□ -2.51
SRP54-214ENST00000630962 ADGBQ8N7X0 1667 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 MYH2Q9UKX2 1941 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 IGHV1-24A0A0C4DH33 117 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 TCRBV3S1A0A5B6 114 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 TMEM210A6NLX4 147 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 ZNF815PA8K554 130 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 OR2H2O95918 312 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 IFNA1P01562 189 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 IFNA21P01568 189 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 S100A6P06703 90 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 ADCYAP1P18509 176 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 TAS2R41P59536 307 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 RPL19P84098 196 aaKnown RBP-0.65□□□□□ -2.51
SRP54-214ENST00000630962 DHRS4L2Q6PKH6 230 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 SSBP3-AS1Q7Z2R9 100 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 UBE2DNLQ8IWF7 75 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 FAM24BQ8N5W8 94 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 TMEM242Q9NWH2 141 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 NUBP2Q9Y5Y2 271 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 LRP5O75197 1615 aa-0.65□□□□□ -2.51
SRP54-214ENST00000630962 SSC5DA1L4H1 1573 aa-0.66□□□□□ -2.51
SRP54-214ENST00000630962 ALMS1Q8TCU4 4167 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 TRAV13-1A0A0B4J241 112 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 TRBV27A0A0K0K1C4 114 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 RBAKDNA6NC62 111 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 CRYGSP22914 178 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 HSD11B1P28845 292 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 GCHFRP30047 84 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 S100A11P31949 105 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 GNG3P63215 75 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 MRPS25P82663 173 aaKnown RBP-0.66□□□□□ -2.52
SRP54-214ENST00000630962 SMIM20Q8N5G0 67 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 MORN4Q8NDC4 146 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 OTOSQ8NHW6 89 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms