RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TCF15Q12870 199 aa12.08□□□□□ -0.48
NPHP4-211ENST00000622020 ETDBQ3ZM63 59 aa12.08□□□□□ -0.48
NPHP4-211ENST00000622020 WFDC12Q8WWY7 111 aa12.08□□□□□ -0.48
NPHP4-211ENST00000622020 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
NPHP4-211ENST00000622020 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
NPHP4-211ENST00000622020 EMP1P54849 157 aa12.07□□□□□ -0.48
NPHP4-211ENST00000622020 Q8N6K4 173 aa12.07□□□□□ -0.48
NPHP4-211ENST00000622020 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-211ENST00000622020 ATP5LO75964 103 aa12.07□□□□□ -0.48
NPHP4-211ENST00000622020 MGPP08493 103 aa12.07□□□□□ -0.48
NPHP4-211ENST00000622020 PHLDA1Q8WV24 401 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-211ENST00000622020 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
NPHP4-211ENST00000622020 SAA4P35542 130 aa12.06□□□□□ -0.48
NPHP4-211ENST00000622020 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
NPHP4-211ENST00000622020 METTL26Q96S19 204 aa12.06□□□□□ -0.48
NPHP4-211ENST00000622020 HIVEP3Q5T1R4 2406 aa12.06□□□□□ -0.48
NPHP4-211ENST00000622020 IGLL5B9A064 214 aa12.05□□□□□ -0.48
NPHP4-211ENST00000622020 F6UB75 175 aa12.05□□□□□ -0.48
NPHP4-211ENST00000622020 SORL1Q92673 2214 aa12.05□□□□□ -0.48
NPHP4-211ENST00000622020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-211ENST00000622020 C12orf74Q32Q52 190 aa12.05□□□□□ -0.48
NPHP4-211ENST00000622020 SIGMAR1Q99720 223 aa12.05□□□□□ -0.48
NPHP4-211ENST00000622020 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPHP4-211ENST00000622020 CRYBG3Q68DQ2 2970 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 C20orf173Q96LM9 149 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 HIGD1BQ9P298 99 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 A0A087WX48 190 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 SRD5A1P18405 259 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 SCGB2A2Q13296 93 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 FAM110DQ8TAY7 271 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-211ENST00000622020 SLC50A1Q9BRV3 221 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 SPTBN4Q9H254 2564 aa12.04□□□□□ -0.48
NPHP4-211ENST00000622020 TRBV12-3P01733 135 aa12.03□□□□□ -0.48
NPHP4-211ENST00000622020 INSL3P51460 131 aa12.03□□□□□ -0.48
NPHP4-211ENST00000622020 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
NPHP4-211ENST00000622020 TM2D2Q9BX73 214 aa12.03□□□□□ -0.48
NPHP4-211ENST00000622020 UNQ9165/PRO28630Q6UXU0 137 aa12.02□□□□□ -0.49
NPHP4-211ENST00000622020 TMEM190Q8WZ59 177 aa12.02□□□□□ -0.49
NPHP4-211ENST00000622020 CSPG4Q6UVK1 2322 aa12.02□□□□□ -0.49
NPHP4-211ENST00000622020 GAGE12HA6NDE8 117 aa12.02□□□□□ -0.49
NPHP4-211ENST00000622020 GNRH2O43555 120 aa12.02□□□□□ -0.49
NPHP4-211ENST00000622020 SMPXQ9UHP9 88 aa12.02□□□□□ -0.49
NPHP4-211ENST00000622020 OR11H12B2RN74 326 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 ADORA2A-AS1P86434 159 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 FOXI2Q6ZQN5 318 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 KLHL30-AS1Q8NEE0 82 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 OR11H1Q8NG94 326 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 OR11H2Q8NH07 326 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 SMIM2Q9BVW6 85 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 DOPEY2Q9Y3R5 2298 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 LINC01546A6NGU7 62 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 RNASE4P34096 147 aaKnown RBP12.01□□□□□ -0.49
NPHP4-211ENST00000622020 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 UBTD1Q9HAC8 227 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 PHLDA3Q9Y5J5 127 aa12.01□□□□□ -0.49
NPHP4-211ENST00000622020 E9PLD3 99 aa12□□□□□ -0.49
NPHP4-211ENST00000622020 SRSF2Q01130 221 aaKnown RBP12□□□□□ -0.49
NPHP4-211ENST00000622020 EBI3Q14213 229 aa12□□□□□ -0.49
NPHP4-211ENST00000622020 PIFOQ8TCI5 191 aa12□□□□□ -0.49
NPHP4-211ENST00000622020 BRD3OSQ6XYD6 125 aa12□□□□□ -0.49
NPHP4-211ENST00000622020 CD300EQ496F6 205 aaPredicted RBP12□□□□□ -0.49
NPHP4-211ENST00000622020 SCGB1D4Q6XE38 83 aa12□□□□□ -0.49
NPHP4-211ENST00000622020 RASL10AQ92737 203 aa12□□□□□ -0.49
NPHP4-211ENST00000622020 SIRPDQ9H106 197 aa12□□□□□ -0.49
NPHP4-211ENST00000622020 RBAKDNA6NC62 111 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 F8VRH5 84 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 H7C1H1 209 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 TGFAP01135 160 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 ARL3P36405 182 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 SUMO2P61956 95 aaKnown RBP11.99□□□□□ -0.49
NPHP4-211ENST00000622020 ATP5G2Q06055 141 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 MINOS1Q5TGZ0 78 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 MINOS1-NBL1R4GNA1 71 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 K7ENP7 123 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 RAXQ9Y2V3 346 aa11.99□□□□□ -0.49
NPHP4-211ENST00000622020 RAB9AP51151 201 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 AJUBAQ96IF1 538 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 BPESC1Q9GZL8 116 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 SPANXB1Q9NS25 103 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-211ENST00000622020 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 PLNP26678 52 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 LY6EQ16553 131 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 C11orf71Q6IPW1 123 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 C2orf66Q6UXQ4 117 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 ATP6V0BQ99437 205 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 JPT2Q9H910 190 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
NPHP4-211ENST00000622020 MYMXA0A1B0GTQ4 84 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 PLEKHB2Q96CS7 222 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 SPAG8Q99932 426 aaPredicted RBP11.97□□□□□ -0.49
NPHP4-211ENST00000622020 PRADC1Q9BSG0 188 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 PGPEP1Q9NXJ5 209 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 APOMO95445 188 aa11.97□□□□□ -0.49
NPHP4-211ENST00000622020 SRSF9Q13242 221 aaKnown RBP eCLIP11.97□□□□□ -0.49
NPHP4-211ENST00000622020 GAGE13Q4V321 117 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms