RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 BORCS7Q96B45 105 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
VTA1-205ENST00000620996 TRAV8-2A0A0B4J237 113 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 HBBP68871 147 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 Q8N976 141 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 RCHY1Q96PM5 261 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 CITED1Q99966 193 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 IGHV7-4-1A0A0J9YVY3 117 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 IGLL1P15814 213 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
VTA1-205ENST00000620996 COX19Q49B96 90 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 GDF5OSQ5U4N7 250 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 DUX3Q96PT4 197 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 U3KQE9 123 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 TRBV6-1A0A0K0K1D8 114 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 FAM231BA6NCW3 169 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 GPX1P07203 203 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 ZNF80P51504 273 aaPredicted RBP7.57□□□□□ -1.2
VTA1-205ENST00000620996 FOXA3P55318 350 aaPredicted RBP7.57□□□□□ -1.2
VTA1-205ENST00000620996 HIST1H1AQ02539 215 aaPredicted RBP7.57□□□□□ -1.2
VTA1-205ENST00000620996 C20orf173Q96LM9 149 aa7.57□□□□□ -1.2
VTA1-205ENST00000620996 MCRIP2Q9BUT9 160 aaKnown RBP7.57□□□□□ -1.2
VTA1-205ENST00000620996 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
VTA1-205ENST00000620996 TSSC4Q9Y5U2 329 aaPredicted RBP7.57□□□□□ -1.2
VTA1-205ENST00000620996 IGHV4OR15-8A0A075B7B6 117 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 A0A087WW49 117 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 ARMS2P0C7Q2 107 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 CT83Q5H943 113 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 AGPAT4-IT1Q9H0P7 198 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 DNAJC9-AS1A6NH13 148 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 F6UB75 175 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 C18orf65Q6ZTR6 163 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 UFC1Q9Y3C8 167 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 MTORP42345 2549 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 A0A1W2PRX2 142 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 H3BUT2 72 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 TEX29Q8N6K0 151 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 OR10J6PQ8NGY7 276 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 SMPXQ9UHP9 88 aa7.56□□□□□ -1.2
VTA1-205ENST00000620996 A0A1B0GUT8 65 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 hDV102S1A0JD36 115 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 C7orf71A4D174 169 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 BRI3O95415 125 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 ELANEP08246 267 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 LGALS1P09382 135 aaKnown RBP7.55□□□□□ -1.2
VTA1-205ENST00000620996 ZNF138P52744 262 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 FOXE3Q13461 319 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 TEX48A0A1B0GUV7 120 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 HAX1O00165 279 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 RIGQ13278 110 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 LYZL1Q6UWQ5 148 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 ATP5L2Q7Z4Y8 100 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 DPF1Q92782 380 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 SMR3AQ99954 134 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
VTA1-205ENST00000620996 NPIPB6E9PJ23 425 aa7.54□□□□□ -1.2
VTA1-205ENST00000620996 HOXD3P31249 432 aaPredicted RBP7.54□□□□□ -1.2
VTA1-205ENST00000620996 BVES-AS1Q5T3Y7 98 aa7.54□□□□□ -1.2
VTA1-205ENST00000620996 SETD2Q9BYW2 2564 aaPredicted RBP7.54□□□□□ -1.2
VTA1-205ENST00000620996 FABP5P3A8MUU1 101 aa7.54□□□□□ -1.2
VTA1-205ENST00000620996 SLURP1P55000 103 aa7.54□□□□□ -1.2
VTA1-205ENST00000620996 RNASEKQ6P5S7 137 aaKnown RBP7.54□□□□□ -1.2
VTA1-205ENST00000620996 FOXC2Q99958 501 aa7.54□□□□□ -1.2
VTA1-205ENST00000620996 PDZD2O15018 2839 aa7.54□□□□□ -1.2
VTA1-205ENST00000620996 IGKV3-20P01619 116 aa7.54□□□□□ -1.2
VTA1-205ENST00000620996 ZNF688P0C7X2 276 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 TWIST1Q15672 202 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 GPHB5Q86YW7 130 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 SMIM20Q8N5G0 67 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 KLHL30-AS1Q8NEE0 82 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 WIPF2Q8TF74 440 aaPredicted RBP7.53□□□□□ -1.2
VTA1-205ENST00000620996 PMCHL2Q9BQD1 86 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 A0A1B0GXF2 115 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 SIVA1O15304 175 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 CD5LO43866 347 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 CSN3P07498 182 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 ID1P41134 155 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 ANXA2RQ3ZCQ2 193 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 UBE2E2Q96LR5 201 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 TMEM213A2RRL7 107 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 TMEM89A2RUT3 159 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 HSD52Q0P140 79 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 Q6ZQT7 251 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 ZNF580Q9UK33 172 aa7.53□□□□□ -1.2
VTA1-205ENST00000620996 RBAKDNA6NC62 111 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 PMCHL1Q16048 86 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 PSMG4Q5JS54 123 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 Q6ZSV7 163 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 MTURNQ8N3F0 131 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 DEFB125Q8N687 156 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 ESM1Q9NQ30 184 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 TRAV9-2A0A087WT02 112 aa7.52□□□□□ -1.21
VTA1-205ENST00000620996 MRPL53Q96EL3 112 aaKnown RBP7.52□□□□□ -1.21
VTA1-205ENST00000620996 GAGE12HA6NDE8 117 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 OVOL1O14753 267 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 RNASE4P34096 147 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms