RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TNFRSF6BO95407 300 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 SRD5A1P18405 259 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 PCP4P48539 62 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 CEP192Q8TEP8 1941 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGHV1-69DA0A0B4J2H0 117 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 OVOL1O14753 267 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGHV1-69P01742 117 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 BLCAPP62952 87 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 PAX2Q02962 417 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 TNFRSF13BO14836 293 aaPredicted RBP4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 HOXA3O43365 443 aaPredicted RBP4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 EMP1P54849 157 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 DYNAPQ8N1N2 210 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 OR9G4Q8NGQ1 327 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 C8orf49Q96NF6 230 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 CCL19Q99731 98 aa4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 DAZ1Q9NQZ3 744 aaKnown RBP4.4□□□□□ -1.71
SYNCRIP-204ENST00000616122 FCN3O75636 299 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 SEC11AP67812 179 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 MRPL51Q4U2R6 128 aaKnown RBP4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 BCL6BQ8N143 479 aaPredicted RBP4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 ZNF256Q9Y2P7 627 aaPredicted RBP4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 TRBV7-1A0A0A6YYK4 115 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 FSTL3O95633 263 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 HERVK_113P61574 105 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 C8orf86Q6ZUL3 223 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 NIPBLQ6KC79 2804 aaeCLIP4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 MSMBP08118 114 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 CD7P09564 240 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 KLF5Q13887 457 aaPredicted RBP4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 LCNL1Q6ZST4 164 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 NPBQ8NG41 125 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 RNF114Q9Y508 228 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 PRAC2D3DTV9 90 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGHV4-39P01824 125 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 CDSNQ15517 529 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 USMG5Q96IX5 58 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 HIST1H4GQ99525 98 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 NHP2Q9NX24 153 aaKnown RBP4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 CRYGBP07316 175 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 COX6B1P14854 86 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 TMEM170BQ5T4T1 132 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 ORAOV1Q8WV07 137 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
SYNCRIP-204ENST00000616122 SRSF1Q07955 248 aaKnown RBP eCLIP4.38□□□□□ -1.712e-6■■■□□ 15.1
SYNCRIP-204ENST00000616122 UBE2V1Q13404 147 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 ORMDL2Q53FV1 153 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 PIP4P2Q8N4L2 257 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 WFDC12Q8WWY7 111 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 DPM2O94777 84 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 ZNF56Q15929 161 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 OR4X2Q8NGF9 303 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 SCRT2Q9NQ03 307 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 PLA2G2DQ9UNK4 145 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 A0A1W2PPR1 153 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 NDUFC2-KCTD14E9PQ53 114 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 AMMECR1LQ6DCA0 310 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 DUX5Q96PT3 197 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 JMJD8Q96S16 334 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 CYSLTR1Q9Y271 337 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 FAM229AH3BQW9 127 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 GATA1P15976 413 aaPredicted RBP4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 SUMO2P61956 95 aaKnown RBP4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 PAPPA-AS1Q5QFB9 102 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 SMPXQ9UHP9 88 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 CD5LO43866 347 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 HSD52Q0P140 79 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 IL17RELQ6ZVW7 336 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 OR1N2Q8NGR9 330 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 SPCS1Q9Y6A9 102 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 NUP210LQ5VU65 1888 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 F6UB75 175 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 ZNF415Q09FC8 603 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 ARL6IP6Q8N6S5 226 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 DYNLRB2Q8TF09 96 aa4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 ITLN2Q8WWU7 325 aaPredicted RBP4.38□□□□□ -1.71
SYNCRIP-204ENST00000616122 NPIPB6E9PJ23 425 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 RNASE4P34096 147 aaKnown RBP4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 EBI3Q14213 229 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 SAMD13Q5VXD3 122 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 SHISA2Q6UWI4 295 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 GTSCR1Q86UQ5 136 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 LOC400499M0QZD8 3231 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 LY6LH3BQJ8 138 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 NDUFS8O00217 210 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 SPRY2O43597 315 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 PAX1P15863 534 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 C2orf66Q6UXQ4 117 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 SIRPDQ9H106 197 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 HIVEP1P15822 2718 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 EXPH5Q8NEV8 1989 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 ZNF48Q96MX3 618 aaPredicted RBP4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 CELSR2Q9HCU4 2923 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 DMXL1Q9Y485 3027 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms