RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 SIVA1O15304 175 aa11.74□□□□□ -0.53
CCL3-204ENST00000613922 GNRH2O43555 120 aa11.74□□□□□ -0.53
CCL3-204ENST00000613922 NXPH4O95158 308 aa11.74□□□□□ -0.53
CCL3-204ENST00000613922 SFTA3P0C7M3 94 aa11.74□□□□□ -0.53
CCL3-204ENST00000613922 GCHFRP30047 84 aa11.74□□□□□ -0.53
CCL3-204ENST00000613922 LYPD5Q6UWN5 251 aa11.74□□□□□ -0.53
CCL3-204ENST00000613922 NAGKQ9UJ70 344 aa11.74□□□□□ -0.53
CCL3-204ENST00000613922 TRAV4A0A0B4J268 109 aa11.73□□□□□ -0.53
CCL3-204ENST00000613922 M0R2P5 195 aa11.73□□□□□ -0.53
CCL3-204ENST00000613922 TYMSP04818 313 aa11.73□□□□□ -0.53
CCL3-204ENST00000613922 C5orf17Q8NAS9 161 aa11.73□□□□□ -0.53
CCL3-204ENST00000613922 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
CCL3-204ENST00000613922 TNFSF18Q9UNG2 199 aa11.73□□□□□ -0.53
CCL3-204ENST00000613922 K7EQD1 137 aa11.72□□□□□ -0.53
CCL3-204ENST00000613922 TCRAP04437 139 aa11.72□□□□□ -0.53
CCL3-204ENST00000613922 LINC00315P59091 139 aa11.72□□□□□ -0.53
CCL3-204ENST00000613922 Q6ZRN7 208 aaPredicted RBP11.72□□□□□ -0.53
CCL3-204ENST00000613922 NEGR1Q7Z3B1 354 aa11.72□□□□□ -0.53
CCL3-204ENST00000613922 SDF2L1Q9HCN8 221 aa11.72□□□□□ -0.53
CCL3-204ENST00000613922 RNF222A6NCQ9 220 aa11.71□□□□□ -0.53
CCL3-204ENST00000613922 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.53
CCL3-204ENST00000613922 KCNS1Q96KK3 526 aa11.71□□□□□ -0.53
CCL3-204ENST00000613922 SGK494Q96LW2 274 aa11.71□□□□□ -0.53
CCL3-204ENST00000613922 NDFIP1Q9BT67 221 aa11.71□□□□□ -0.53
CCL3-204ENST00000613922 ACTR3CQ9C0K3 210 aaPredicted RBP11.71□□□□□ -0.53
CCL3-204ENST00000613922 TMEM167BQ9NRX6 74 aa11.71□□□□□ -0.53
CCL3-204ENST00000613922 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
CCL3-204ENST00000613922 CDK2AP2O75956 126 aa11.7□□□□□ -0.54
CCL3-204ENST00000613922 CXorf1O96002 111 aa11.7□□□□□ -0.54
CCL3-204ENST00000613922 IGLV2-11P01706 119 aa11.7□□□□□ -0.54
CCL3-204ENST00000613922 ORM1P02763 201 aa11.7□□□□□ -0.54
CCL3-204ENST00000613922 SRIP30626 198 aa11.7□□□□□ -0.54
CCL3-204ENST00000613922 RPL7L1Q6DKI1 246 aaKnown RBP11.7□□□□□ -0.54
CCL3-204ENST00000613922 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
CCL3-204ENST00000613922 PSG8Q9UQ74 426 aa11.7□□□□□ -0.54
CCL3-204ENST00000613922 K7EQM0 130 aa11.69□□□□□ -0.54
CCL3-204ENST00000613922 GYPEP15421 78 aa11.69□□□□□ -0.54
CCL3-204ENST00000613922 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
CCL3-204ENST00000613922 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
CCL3-204ENST00000613922 OR4C5Q8NGB2 326 aa11.69□□□□□ -0.54
CCL3-204ENST00000613922 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
CCL3-204ENST00000613922 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
CCL3-204ENST00000613922 FXYD6-FXYD2A0A087WZ82 144 aa11.68□□□□□ -0.54
CCL3-204ENST00000613922 TMEM75Q8N9X5 138 aa11.68□□□□□ -0.54
CCL3-204ENST00000613922 PCNPQ8WW12 178 aaKnown RBP11.68□□□□□ -0.54
CCL3-204ENST00000613922 BORCS7-ASMTA0A0B4J1R7 106 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 FBLL1A6NHQ2 334 aaKnown RBP11.67□□□□□ -0.54
CCL3-204ENST00000613922 C9JCJ5 164 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 TAAR5O14804 337 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 PFN1P07737 140 aaKnown RBP11.67□□□□□ -0.54
CCL3-204ENST00000613922 KRTAP10-2P60368 255 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 FLI1Q01543 452 aaPredicted RBP11.67□□□□□ -0.54
CCL3-204ENST00000613922 ZNF726P1Q15940 193 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 TXNDC17Q9BRA2 123 aa11.67□□□□□ -0.54
CCL3-204ENST00000613922 G3V3Q6 166 aa11.66□□□□□ -0.54
CCL3-204ENST00000613922 GCGP01275 180 aa11.66□□□□□ -0.54
CCL3-204ENST00000613922 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
CCL3-204ENST00000613922 SMUG1Q53HV7 270 aa11.66□□□□□ -0.54
CCL3-204ENST00000613922 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
CCL3-204ENST00000613922 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.54
CCL3-204ENST00000613922 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
CCL3-204ENST00000613922 WFDC10BQ8IUB3 73 aa11.65□□□□□ -0.54
CCL3-204ENST00000613922 PTH2Q96A98 100 aa11.65□□□□□ -0.54
CCL3-204ENST00000613922 KRTAP4-5Q9BYR2 181 aa11.65□□□□□ -0.54
CCL3-204ENST00000613922 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.54
CCL3-204ENST00000613922 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 K7EP13 123 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 RS1O15537 224 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 CIDEAO60543 219 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 TIRAPP58753 221 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 ZNF876PQ49A33 203 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 SAPCD1Q5SSQ6 148 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 DPPA3Q6W0C5 159 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 TNFRSF18Q9Y5U5 241 aa11.64□□□□□ -0.55
CCL3-204ENST00000613922 TRAV9-2A0A087WT02 112 aa11.63□□□□□ -0.55
CCL3-204ENST00000613922 CFAP126Q5VTH2 177 aa11.63□□□□□ -0.55
CCL3-204ENST00000613922 NFE4Q86UQ8 179 aa11.63□□□□□ -0.55
CCL3-204ENST00000613922 RNASE3P12724 160 aaKnown RBP11.62□□□□□ -0.55
CCL3-204ENST00000613922 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
CCL3-204ENST00000613922 LINC00479Q96M42 142 aa11.62□□□□□ -0.55
CCL3-204ENST00000613922 CYTL1Q9NRR1 136 aa11.62□□□□□ -0.55
CCL3-204ENST00000613922 TRAV34A0A0B4J273 112 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 PGPEP1LA6NFU8 196 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 FAM74A7A6NL05 159 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 EVI2AP22794 236 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 ZNF506Q5JVG8 444 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 AKR1C8PQ5T2L2 129 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 SLC25A29Q8N8R3 303 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 NKX6-2Q9C056 277 aaPredicted RBP11.61□□□□□ -0.55
CCL3-204ENST00000613922 MSRB1Q9NZV6 116 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 ARL2-SNX15V9GYD0 113 aa11.61□□□□□ -0.55
CCL3-204ENST00000613922 IGKV3D-20A0A0C4DH25 116 aa11.6□□□□□ -0.55
CCL3-204ENST00000613922 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
CCL3-204ENST00000613922 PEX7O00628 323 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms