RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 MED28Q9H204 178 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 NAGKQ9UJ70 344 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 PGPA6NDG6 321 aa12.04□□□□□ -0.48
SSBP1-215ENST00000612337 C9JCJ5 164 aa12.04□□□□□ -0.48
SSBP1-215ENST00000612337 EIF3GO75821 320 aaKnown RBP eCLIP12.04□□□□□ -0.487e-6■□□□□ 9.1
SSBP1-215ENST00000612337 DNAH10OSP0CZ25 163 aa12.04□□□□□ -0.48
SSBP1-215ENST00000612337 FAM74A1Q5RGS3 127 aa12.04□□□□□ -0.48
SSBP1-215ENST00000612337 ARL6IP6Q8N6S5 226 aa12.04□□□□□ -0.48
SSBP1-215ENST00000612337 TRAV21A0A0B4J279 112 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 EPM2AB3EWF7 344 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 M0R2P5 195 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 GNRH2O43555 120 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 PQLC2Q6ZP29 291 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 OR4C5Q8NGB2 326 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 RPH3ALQ9UNE2 315 aa12.03□□□□□ -0.48
SSBP1-215ENST00000612337 XGP55808 180 aa12.02□□□□□ -0.49
SSBP1-215ENST00000612337 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-215ENST00000612337 GOLT1AQ6ZVE7 132 aa12.02□□□□□ -0.49
SSBP1-215ENST00000612337 MYCBP2O75592 4640 aa12.02□□□□□ -0.49
SSBP1-215ENST00000612337 TYMSP04818 313 aa12.01□□□□□ -0.49
SSBP1-215ENST00000612337 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
SSBP1-215ENST00000612337 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
SSBP1-215ENST00000612337 TVP23CQ96ET8 276 aa12.01□□□□□ -0.49
SSBP1-215ENST00000612337 TRAV8-1A0A0A6YYK1 113 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 A0A1W2PPV4 95 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 F6UZH7 168 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 CRYGDP07320 174 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 TIRAPP58753 221 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 KCNS1Q96KK3 526 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 AQP10Q96PS8 301 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 SDF2L1Q9HCN8 221 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 TREM1Q9NP99 234 aa12□□□□□ -0.49
SSBP1-215ENST00000612337 LOC100131303A0A0U1RQF7 123 aa11.99□□□□□ -0.49
SSBP1-215ENST00000612337 GATA1P15976 413 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-215ENST00000612337 KRTAP10-1P60331 282 aa11.99□□□□□ -0.49
SSBP1-215ENST00000612337 RAB2AP61019 212 aa11.99□□□□□ -0.49
SSBP1-215ENST00000612337 ASB13Q8WXK3 278 aa11.99□□□□□ -0.49
SSBP1-215ENST00000612337 GIPP09681 153 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-215ENST00000612337 GNG5P63218 68 aa11.98□□□□□ -0.49
SSBP1-215ENST00000612337 Q5BKY6 102 aa11.98□□□□□ -0.49
SSBP1-215ENST00000612337 NHLRC2Q8NBF2 726 aa11.98□□□□□ -0.49
SSBP1-215ENST00000612337 DMBT1Q9UGM3 2413 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-215ENST00000612337 IGHV3-38A0A0C4DH36 116 aa11.97□□□□□ -0.49
SSBP1-215ENST00000612337 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
SSBP1-215ENST00000612337 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
SSBP1-215ENST00000612337 OR2G3Q8NGZ4 309 aa11.97□□□□□ -0.49
SSBP1-215ENST00000612337 SERTM2A0A1B0GWG4 89 aa11.96□□□□□ -0.49
SSBP1-215ENST00000612337 FBLL1A6NHQ2 334 aaKnown RBP11.96□□□□□ -0.49
SSBP1-215ENST00000612337 HMGB3O15347 200 aaKnown RBP11.96□□□□□ -0.49
SSBP1-215ENST00000612337 PPT1P50897 306 aa11.96□□□□□ -0.49
SSBP1-215ENST00000612337 HSD17B11Q8NBQ5 300 aa11.96□□□□□ -0.49
SSBP1-215ENST00000612337 NDFIP1Q9BT67 221 aa11.96□□□□□ -0.49
SSBP1-215ENST00000612337 SRRM2Q9UQ35 2752 aaKnown RBP11.96□□□□□ -0.49
SSBP1-215ENST00000612337 CIDEAO60543 219 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 PFN1P07737 140 aaKnown RBP11.95□□□□□ -0.5
SSBP1-215ENST00000612337 ARL14EPLP0DKL9 152 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 GCSHP23434 173 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 SLC25A29Q8N8R3 303 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 FRZBQ92765 325 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
SSBP1-215ENST00000612337 PSMG3Q9BT73 122 aaPredicted RBP11.95□□□□□ -0.5
SSBP1-215ENST00000612337 RS1O15537 224 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 STAG3L2P0CL84 134 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 STAG3L3P0CL85 134 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 ATP6V0CP27449 155 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 CDC34P49427 236 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-215ENST00000612337 RGS21Q2M5E4 152 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 ZNF876PQ49A33 203 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 Q5VSD8 79 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 C5orf17Q8NAS9 161 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-215ENST00000612337 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
SSBP1-215ENST00000612337 TRAV8-6A0A0B4J262 113 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 IBA57-AS1B1ANH7 110 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 TAAR5O14804 337 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 PSCAO43653 123 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 TCRAP04437 139 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 ZNF80P51504 273 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-215ENST00000612337 SERF2P84101 59 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 RHOHQ15669 191 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 SUN5Q8TC36 379 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 PRADC1Q9BSG0 188 aa11.93□□□□□ -0.5
SSBP1-215ENST00000612337 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 RNF222A6NCQ9 220 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 K7EQM0 130 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 GCGP01275 180 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 MBP02144 154 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 DPPA3Q6W0C5 159 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-215ENST00000612337 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 C9orf85Q96MD7 179 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 TNFSF18Q9UNG2 199 aa11.92□□□□□ -0.5
SSBP1-215ENST00000612337 FXYD6-FXYD2A0A087WZ82 144 aa11.91□□□□□ -0.5
SSBP1-215ENST00000612337 GCHFRP30047 84 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms