RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 ORAOV1Q8WV07 137 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 CBY1Q9Y3M2 126 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 IGHV1-24A0A0C4DH33 117 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 OR4C46A6NHA9 309 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 A8MWL6 223 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 ZNF80P51504 273 aaPredicted RBP13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 LYPD1Q8N2G4 141 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 SMPXQ9UHP9 88 aa13.79□□□□□ -0.2
SNAPC3-207ENST00000610884 SMIM12Q96EX1 92 aa13.78□□□□□ -0.2
SNAPC3-207ENST00000610884 MYOZ3Q8TDC0 251 aa13.78□□□□□ -0.2
SNAPC3-207ENST00000610884 DAZAP1Q96EP5 407 aaKnown RBP13.78□□□□□ -0.2
SNAPC3-207ENST00000610884 COX11Q9Y6N1 276 aa13.78□□□□□ -0.2
SNAPC3-207ENST00000610884 C19orf71A6NCJ1 209 aa13.77□□□□□ -0.21
SNAPC3-207ENST00000610884 CITED2Q99967 270 aaPredicted RBP13.77□□□□□ -0.21
SNAPC3-207ENST00000610884 ADAMTSL5Q6ZMM2 481 aa13.76□□□□□ -0.21
SNAPC3-207ENST00000610884 TPPP3Q9BW30 176 aa13.76□□□□□ -0.21
SNAPC3-207ENST00000610884 AGPAT4-IT1Q9H0P7 198 aa13.76□□□□□ -0.21
SNAPC3-207ENST00000610884 TRRAPQ9Y4A5 3859 aa13.76□□□□□ -0.21
SNAPC3-207ENST00000610884 hDV102S1A0JD36 115 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 K7EQM0 130 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 LEPROTL1O95214 131 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 KIR3DS1Q14943 382 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 RBPMS2Q6ZRY4 209 aaKnown RBP13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 ZNF738Q8NE65 137 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 ZNF418Q8TF45 676 aaPredicted RBP13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 DLX4Q92988 240 aaPredicted RBP13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 SYS1-DBNDD2H3BUS1 97 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 CT83Q5H943 113 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 ATP6V0BQ99437 205 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 ZNF492Q9P255 531 aa13.75□□□□□ -0.21
SNAPC3-207ENST00000610884 A0A087X0K7 114 aa13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 ZNF138P52744 262 aa13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 FAM162BQ5T6X4 162 aa13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 PRR25Q96S07 402 aa13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 H0Y8G0 127 aa13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 HILS1P60008 231 aa13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 TEX29Q8N6K0 151 aa13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 CHCHD1Q96BP2 118 aaKnown RBP13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 TIMM8BQ9Y5J9 83 aaPredicted RBP13.74□□□□□ -0.21
SNAPC3-207ENST00000610884 IGKV3-20P01619 116 aa13.73□□□□□ -0.21
SNAPC3-207ENST00000610884 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
SNAPC3-207ENST00000610884 ERASQ7Z444 233 aa13.73□□□□□ -0.21
SNAPC3-207ENST00000610884 MCRIP2Q9BUT9 160 aaKnown RBP13.73□□□□□ -0.21
SNAPC3-207ENST00000610884 LOC102724200A0A096LPH7 203 aaPredicted RBP13.73□□□□□ -0.21
SNAPC3-207ENST00000610884 ZNF688P0C7X2 276 aa13.73□□□□□ -0.21
SNAPC3-207ENST00000610884 OR1N2Q8NGR9 330 aa13.73□□□□□ -0.21
SNAPC3-207ENST00000610884 CRXO43186 299 aaPredicted RBP13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 UBE2V1Q13404 147 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 RNF152Q8N8N0 203 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 DPF1Q92782 380 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 TMEM89A2RUT3 159 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 SOCS3O14543 225 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 CSN3P07498 182 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 MPV17L2Q567V2 206 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 GFRA4Q9GZZ7 299 aa13.72□□□□□ -0.21
SNAPC3-207ENST00000610884 RNASE8Q8TDE3 154 aaKnown RBP13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 RAX2Q96IS3 184 aa13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 MS4A6AQ9H2W1 248 aa13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 ST20Q9HBF5 79 aa13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 SPRY2O43597 315 aa13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 S100A7P31151 101 aa13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 SLC50A1Q9BRV3 221 aa13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 UFC1Q9Y3C8 167 aa13.71□□□□□ -0.21
SNAPC3-207ENST00000610884 PCP4P48539 62 aa13.7□□□□□ -0.22
SNAPC3-207ENST00000610884 NSUN5P1Q3KNT7 163 aa13.7□□□□□ -0.22
SNAPC3-207ENST00000610884 NPIPB6E9PJ23 425 aa13.7□□□□□ -0.22
SNAPC3-207ENST00000610884 SH2D1AO60880 128 aa13.7□□□□□ -0.22
SNAPC3-207ENST00000610884 HIST1H1AQ02539 215 aaPredicted RBP13.7□□□□□ -0.22
SNAPC3-207ENST00000610884 PRR9Q5T870 116 aa13.7□□□□□ -0.22
SNAPC3-207ENST00000610884 FBN1P35555 2871 aaKnown RBP13.7□□□□□ -0.22
SNAPC3-207ENST00000610884 LINC01619G3V211 115 aa13.69□□□□□ -0.22
SNAPC3-207ENST00000610884 DCANP1Q8TF63 244 aa13.69□□□□□ -0.22
SNAPC3-207ENST00000610884 PMCHL2Q9BQD1 86 aa13.69□□□□□ -0.22
SNAPC3-207ENST00000610884 TMEM191AQ9H0A3 160 aa13.69□□□□□ -0.22
SNAPC3-207ENST00000610884 KRTAP10-3P60369 221 aa13.69□□□□□ -0.22
SNAPC3-207ENST00000610884 NDFIP1Q9BT67 221 aa13.69□□□□□ -0.22
SNAPC3-207ENST00000610884 MAP1LC3CQ9BXW4 147 aa13.69□□□□□ -0.22
SNAPC3-207ENST00000610884 K7EMT4 169 aa13.68□□□□□ -0.22
SNAPC3-207ENST00000610884 PSMG4Q5JS54 123 aa13.68□□□□□ -0.22
SNAPC3-207ENST00000610884 C4orf3Q8WVX3 66 aa13.68□□□□□ -0.22
SNAPC3-207ENST00000610884 HSBP1L1C9JCN9 74 aa13.68□□□□□ -0.22
SNAPC3-207ENST00000610884 NUDT3O95989 172 aa13.68□□□□□ -0.22
SNAPC3-207ENST00000610884 CT45A10P0DMU9 189 aa13.68□□□□□ -0.22
SNAPC3-207ENST00000610884 SLC25A34Q6PIV7 304 aa13.68□□□□□ -0.22
SNAPC3-207ENST00000610884 FAM231BA6NCW3 169 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 ARMS2P0C7Q2 107 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 ZNF575Q86XF7 245 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 OR4C5Q8NGB2 326 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 C11orf21Q9P2W6 132 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 ORM1P02763 201 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 VAMP3Q15836 100 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 TMEM78Q5T7P6 136 aa13.67□□□□□ -0.22
SNAPC3-207ENST00000610884 A0A1B0GUT8 65 aa13.65□□□□□ -0.22
SNAPC3-207ENST00000610884 OR9G4Q8NGQ1 327 aa13.65□□□□□ -0.22
SNAPC3-207ENST00000610884 SCRT2Q9NQ03 307 aa13.65□□□□□ -0.22
SNAPC3-207ENST00000610884 CCL24O00175 119 aa13.65□□□□□ -0.22
SNAPC3-207ENST00000610884 OR5AL1P0C617 328 aa13.65□□□□□ -0.22
SNAPC3-207ENST00000610884 BVES-AS1Q5T3Y7 98 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms