RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 HHLA3Q9XRX5 114 aa13.38□□□□□ -0.27
TCF3-219ENST00000610756 NACAE9PAV3 2078 aa13.37□□□□□ -0.27
TCF3-219ENST00000610756 A0A096LPF7 62 aa13.37□□□□□ -0.27
TCF3-219ENST00000610756 IFNA7P01567 189 aa13.37□□□□□ -0.27
TCF3-219ENST00000610756 SEC11BP0C7V7 166 aa13.37□□□□□ -0.27
TCF3-219ENST00000610756 ZNF80P51504 273 aaPredicted RBP13.37□□□□□ -0.27
TCF3-219ENST00000610756 PRNTQ86SH4 94 aa13.37□□□□□ -0.27
TCF3-219ENST00000610756 C8orf49Q96NF6 230 aa13.37□□□□□ -0.27
TCF3-219ENST00000610756 SDF2L1Q9HCN8 221 aa13.37□□□□□ -0.27
TCF3-219ENST00000610756 MUC4Q99102 2169 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 NBDYA0A0U1RRE5 68 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 MAP1LC3B2A6NCE7 125 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 FAM74A7A6NL05 159 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 PAX4O43316 350 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 IGHV3-53P01767 116 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 UBE2G2P60604 165 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 SMUG1Q53HV7 270 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 SOHLH1Q5JUK2 328 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 LINC00479Q96M42 142 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 UPK3BQ9BT76 320 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 MAP1LC3BQ9GZQ8 125 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 Q9H8V8 135 aa13.36□□□□□ -0.27
TCF3-219ENST00000610756 PRSS29PA6NIE9 313 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 M0R2P5 195 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 GCGP01275 180 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 TYMSP04818 313 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 PFN1P07737 140 aaKnown RBP13.35□□□□□ -0.27
TCF3-219ENST00000610756 CRYBA4P53673 196 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 C1orf134Q5TEV5 83 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 STOML3Q8TAV4 291 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 HIST1H2BAQ96A08 127 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 C11orf21Q9P2W6 132 aa13.35□□□□□ -0.27
TCF3-219ENST00000610756 UMAD1C9J7I0 102 aa13.34□□□□□ -0.27
TCF3-219ENST00000610756 FHITP49789 147 aa13.34□□□□□ -0.27
TCF3-219ENST00000610756 PPT1P50897 306 aa13.34□□□□□ -0.27
TCF3-219ENST00000610756 ZFP69Q49AA0 526 aa13.34□□□□□ -0.27
TCF3-219ENST00000610756 ZNF479Q96JC4 524 aa13.34□□□□□ -0.27
TCF3-219ENST00000610756 A0A1B0GVY2 172 aa13.33□□□□□ -0.28
TCF3-219ENST00000610756 KANTRA0A1W2PQU2 76 aa13.33□□□□□ -0.28
TCF3-219ENST00000610756 PEX7O00628 323 aa13.33□□□□□ -0.28
TCF3-219ENST00000610756 BCL2L11O43521 198 aa13.33□□□□□ -0.28
TCF3-219ENST00000610756 MBD3L1Q8WWY6 194 aa13.33□□□□□ -0.28
TCF3-219ENST00000610756 ZNF471Q9BX82 626 aaPredicted RBP13.33□□□□□ -0.28
TCF3-219ENST00000610756 MRPS16Q9Y3D3 137 aaKnown RBP13.33□□□□□ -0.28
TCF3-219ENST00000610756 ICOSQ9Y6W8 199 aa13.33□□□□□ -0.28
TCF3-219ENST00000610756 TRAV34A0A0B4J273 112 aa13.32□□□□□ -0.28
TCF3-219ENST00000610756 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
TCF3-219ENST00000610756 SFTA3P0C7M3 94 aa13.32□□□□□ -0.28
TCF3-219ENST00000610756 EIF5AP63241 154 aaKnown RBP13.32□□□□□ -0.28
TCF3-219ENST00000610756 TRAV4A0A0B4J268 109 aa13.31□□□□□ -0.28
TCF3-219ENST00000610756 MRPL23Q16540 153 aaKnown RBP13.31□□□□□ -0.28
TCF3-219ENST00000610756 TCEAL7Q9BRU2 100 aa13.31□□□□□ -0.28
TCF3-219ENST00000610756 ARL2-SNX15V9GYD0 113 aa13.31□□□□□ -0.28
TCF3-219ENST00000610756 FABP5P3A8MUU1 101 aa13.3□□□□□ -0.28
TCF3-219ENST00000610756 DPPA3Q6W0C5 159 aa13.3□□□□□ -0.28
TCF3-219ENST00000610756 TMUB2Q71RG4 321 aa13.3□□□□□ -0.28
TCF3-219ENST00000610756 OR4C5Q8NGB2 326 aa13.3□□□□□ -0.28
TCF3-219ENST00000610756 SFT2D1Q8WV19 159 aa13.3□□□□□ -0.28
TCF3-219ENST00000610756 ZFP30Q9Y2G7 519 aa13.3□□□□□ -0.28
TCF3-219ENST00000610756 COX8CQ7Z4L0 72 aa13.29□□□□□ -0.28
TCF3-219ENST00000610756 C6orf223Q8N319 242 aa13.29□□□□□ -0.28
TCF3-219ENST00000610756 PTH2Q96A98 100 aa13.29□□□□□ -0.28
TCF3-219ENST00000610756 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
TCF3-219ENST00000610756 CST9LP1Q5W188 147 aa13.28□□□□□ -0.28
TCF3-219ENST00000610756 FAM213BQ8TBF2 198 aa13.28□□□□□ -0.28
TCF3-219ENST00000610756 FMC1Q96HJ9 113 aa13.28□□□□□ -0.28
TCF3-219ENST00000610756 C9orf85Q96MD7 179 aa13.28□□□□□ -0.28
TCF3-219ENST00000610756 PKD1P98161 4303 aa13.28□□□□□ -0.28
TCF3-219ENST00000610756 IGKV3D-20A0A0C4DH25 116 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 A0A1W2PPQ1 181 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 CIDEAO60543 219 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 PFDN1O60925 122 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 ORM1P02763 201 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 TPT1P13693 172 aaKnown RBP13.27□□□□□ -0.29
TCF3-219ENST00000610756 LGALSLQ3ZCW2 172 aaPredicted RBP13.27□□□□□ -0.29
TCF3-219ENST00000610756 TTC32Q5I0X7 151 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 LYPD5Q6UWN5 251 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 NEGR1Q7Z3B1 354 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 Q86TA4 180 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 PKHD1P08F94 4074 aa13.27□□□□□ -0.29
TCF3-219ENST00000610756 C9JCJ5 164 aa13.26□□□□□ -0.29
TCF3-219ENST00000610756 K7EQD1 137 aa13.26□□□□□ -0.29
TCF3-219ENST00000610756 PAGE4O60829 102 aa13.26□□□□□ -0.29
TCF3-219ENST00000610756 RNASE3P12724 160 aaKnown RBP13.26□□□□□ -0.29
TCF3-219ENST00000610756 CRIP1P50238 77 aa13.26□□□□□ -0.29
TCF3-219ENST00000610756 TCTE3Q8IZS6 198 aa13.26□□□□□ -0.29
TCF3-219ENST00000610756 H2AFB1P0C5Y9 115 aa13.25□□□□□ -0.29
TCF3-219ENST00000610756 UBE2G1P62253 170 aa13.25□□□□□ -0.29
TCF3-219ENST00000610756 Q6ZNX1 250 aa13.25□□□□□ -0.29
TCF3-219ENST00000610756 RS1O15537 224 aa13.24□□□□□ -0.29
TCF3-219ENST00000610756 GYPEP15421 78 aa13.24□□□□□ -0.29
TCF3-219ENST00000610756 BTF3P20290 206 aaKnown RBP13.24□□□□□ -0.29
TCF3-219ENST00000610756 CFAP126Q5VTH2 177 aa13.24□□□□□ -0.29
TCF3-219ENST00000610756 ZC2HC1AQ96GY0 325 aa13.24□□□□□ -0.29
TCF3-219ENST00000610756 KRTAP1-5Q9BYS1 174 aa13.24□□□□□ -0.29
TCF3-219ENST00000610756 PGPEP1LA6NFU8 196 aa13.23□□□□□ -0.29
TCF3-219ENST00000610756 SIVA1O15304 175 aa13.23□□□□□ -0.29
TCF3-219ENST00000610756 LTAP01374 205 aa13.23□□□□□ -0.29
TCF3-219ENST00000610756 GATA1P15976 413 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms