RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 MRPL23Q16540 153 aaKnown RBP12.47□□□□□ -0.41
CCDC12-208ENST00000603885 ZNF479Q96JC4 524 aa12.47□□□□□ -0.41
CCDC12-208ENST00000603885 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
CCDC12-208ENST00000603885 SGK494Q96LW2 274 aa12.47□□□□□ -0.41
CCDC12-208ENST00000603885 SDF2L1Q9HCN8 221 aa12.47□□□□□ -0.41
CCDC12-208ENST00000603885 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.41
CCDC12-208ENST00000603885 M0R2P5 195 aa12.46□□□□□ -0.41
CCDC12-208ENST00000603885 GNRH2O43555 120 aa12.46□□□□□ -0.41
CCDC12-208ENST00000603885 TYMSP04818 313 aa12.46□□□□□ -0.41
CCDC12-208ENST00000603885 SUMO1P63165 101 aaKnown RBP12.46□□□□□ -0.41
CCDC12-208ENST00000603885 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
CCDC12-208ENST00000603885 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
CCDC12-208ENST00000603885 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
CCDC12-208ENST00000603885 GGTLC3B5MD39 225 aa12.45□□□□□ -0.42
CCDC12-208ENST00000603885 BTF3P20290 206 aaKnown RBP12.45□□□□□ -0.42
CCDC12-208ENST00000603885 PCNPQ8WW12 178 aaKnown RBP12.45□□□□□ -0.42
CCDC12-208ENST00000603885 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
CCDC12-208ENST00000603885 PSG8Q9UQ74 426 aa12.45□□□□□ -0.42
CCDC12-208ENST00000603885 SIVA1O15304 175 aa12.44□□□□□ -0.42
CCDC12-208ENST00000603885 NXPH4O95158 308 aa12.44□□□□□ -0.42
CCDC12-208ENST00000603885 FLI1Q01543 452 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-208ENST00000603885 ZFP69Q49AA0 526 aa12.44□□□□□ -0.42
CCDC12-208ENST00000603885 NEGR1Q7Z3B1 354 aa12.44□□□□□ -0.42
CCDC12-208ENST00000603885 CYB561D1Q8N8Q1 229 aa12.44□□□□□ -0.42
CCDC12-208ENST00000603885 OR4C5Q8NGB2 326 aa12.44□□□□□ -0.42
CCDC12-208ENST00000603885 CTXND1A0A1B0GTU2 59 aa12.43□□□□□ -0.42
CCDC12-208ENST00000603885 A0A1W2PRE2 83 aa12.43□□□□□ -0.42
CCDC12-208ENST00000603885 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
CCDC12-208ENST00000603885 TAAR5O14804 337 aa12.43□□□□□ -0.42
CCDC12-208ENST00000603885 ORM1P02763 201 aa12.43□□□□□ -0.42
CCDC12-208ENST00000603885 SRIP30626 198 aa12.43□□□□□ -0.42
CCDC12-208ENST00000603885 TMEM75Q8N9X5 138 aa12.43□□□□□ -0.42
CCDC12-208ENST00000603885 G3V3Q6 166 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 K7EQD1 137 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 GCGP01275 180 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 IGLV2-11P01706 119 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 ZNF80P51504 273 aaPredicted RBP12.42□□□□□ -0.42
CCDC12-208ENST00000603885 ZNF726P1Q15940 193 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 SMUG1Q53HV7 270 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 AKR1C8PQ5T2L2 129 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
CCDC12-208ENST00000603885 C16orf90A8MZG2 172 aa12.41□□□□□ -0.42
CCDC12-208ENST00000603885 C9JCJ5 164 aa12.41□□□□□ -0.42
CCDC12-208ENST00000603885 ARPC5O15511 151 aa12.41□□□□□ -0.42
CCDC12-208ENST00000603885 PFN1P07737 140 aaKnown RBP12.41□□□□□ -0.42
CCDC12-208ENST00000603885 GYPEP15421 78 aa12.41□□□□□ -0.42
CCDC12-208ENST00000603885 SAPCD1Q5SSQ6 148 aa12.41□□□□□ -0.42
CCDC12-208ENST00000603885 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
CCDC12-208ENST00000603885 C11orf21Q9P2W6 132 aa12.4□□□□□ -0.42
CCDC12-208ENST00000603885 IFNA7P01567 189 aa12.39□□□□□ -0.43
CCDC12-208ENST00000603885 PPT1P50897 306 aa12.39□□□□□ -0.43
CCDC12-208ENST00000603885 LINC00315P59091 139 aa12.39□□□□□ -0.43
CCDC12-208ENST00000603885 UBE2G2P60604 165 aa12.39□□□□□ -0.43
CCDC12-208ENST00000603885 FGF8P55075 233 aaPredicted RBP12.38□□□□□ -0.43
CCDC12-208ENST00000603885 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
CCDC12-208ENST00000603885 NKX6-2Q9C056 277 aaPredicted RBP12.38□□□□□ -0.43
CCDC12-208ENST00000603885 TRAV34A0A0B4J273 112 aa12.37□□□□□ -0.43
CCDC12-208ENST00000603885 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
CCDC12-208ENST00000603885 LINC00479Q96M42 142 aa12.37□□□□□ -0.43
CCDC12-208ENST00000603885 C9orf85Q96MD7 179 aa12.37□□□□□ -0.43
CCDC12-208ENST00000603885 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
CCDC12-208ENST00000603885 ARL2-SNX15V9GYD0 113 aa12.37□□□□□ -0.43
CCDC12-208ENST00000603885 TRAV9-2A0A087WT02 112 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 PEX7O00628 323 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 GATA1P15976 413 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-208ENST00000603885 SH2D6Q7Z4S9 175 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 KRTAP17-1Q9BYP8 105 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 LY96Q9Y6Y9 160 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 PCLOQ9Y6V0 5065 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 RYR1P21817 5038 aa12.36□□□□□ -0.43
CCDC12-208ENST00000603885 LRP1BQ9NZR2 4599 aa12.35□□□□□ -0.43
CCDC12-208ENST00000603885 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
CCDC12-208ENST00000603885 SMLR1H3BR10 107 aa12.35□□□□□ -0.43
CCDC12-208ENST00000603885 CIDEAO60543 219 aa12.35□□□□□ -0.43
CCDC12-208ENST00000603885 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
CCDC12-208ENST00000603885 NHLRC2Q8NBF2 726 aa12.35□□□□□ -0.43
CCDC12-208ENST00000603885 RS1O15537 224 aa12.34□□□□□ -0.43
CCDC12-208ENST00000603885 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
CCDC12-208ENST00000603885 Q86TA4 180 aa12.34□□□□□ -0.43
CCDC12-208ENST00000603885 WFDC10BQ8IUB3 73 aa12.34□□□□□ -0.43
CCDC12-208ENST00000603885 STOML3Q8TAV4 291 aa12.34□□□□□ -0.43
CCDC12-208ENST00000603885 PTH2Q96A98 100 aa12.34□□□□□ -0.43
CCDC12-208ENST00000603885 HSPG2P98160 4391 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 K7EP13 123 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
CCDC12-208ENST00000603885 EVI2AP22794 236 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 ZNF345Q14585 488 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 ZNF506Q5JVG8 444 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 NFE4Q86UQ8 179 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 PRADC1Q9BSG0 188 aa12.33□□□□□ -0.44
CCDC12-208ENST00000603885 IGKV3D-20A0A0C4DH25 116 aa12.32□□□□□ -0.44
CCDC12-208ENST00000603885 PGPEP1LA6NFU8 196 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms