RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PFN1P07737 140 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-227ENST00000602011 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
SHKBP1-227ENST00000602011 PET100P0DJ07 73 aa12.05□□□□□ -0.48
SHKBP1-227ENST00000602011 Q5VSD8 79 aa12.05□□□□□ -0.48
SHKBP1-227ENST00000602011 SCGB1C1Q8TD33 95 aa12.05□□□□□ -0.48
SHKBP1-227ENST00000602011 OTORQ9NRC9 128 aa12.05□□□□□ -0.48
SHKBP1-227ENST00000602011 FAM229AH3BQW9 127 aa12.04□□□□□ -0.48
SHKBP1-227ENST00000602011 WFDC10BQ8IUB3 73 aa12.04□□□□□ -0.48
SHKBP1-227ENST00000602011 SH3BGRL3Q9H299 93 aa12.04□□□□□ -0.48
SHKBP1-227ENST00000602011 OR5AC2Q9NZP5 309 aa12.04□□□□□ -0.48
SHKBP1-227ENST00000602011 ALG5Q9Y673 324 aa12.04□□□□□ -0.48
SHKBP1-227ENST00000602011 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
SHKBP1-227ENST00000602011 KRTAP10-1P60331 282 aa12.03□□□□□ -0.48
SHKBP1-227ENST00000602011 FFAR4Q5NUL3 377 aa12.03□□□□□ -0.48
SHKBP1-227ENST00000602011 PQLC2Q6ZP29 291 aa12.03□□□□□ -0.48
SHKBP1-227ENST00000602011 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 PGPA6NDG6 321 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 H0YIZ8 118 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 PSCAO43653 123 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 LRRC37A5PQ49AS3 106 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 LINC01556Q5JQF7 62 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 MBD2Q9UBB5 411 aa12.02□□□□□ -0.49
SHKBP1-227ENST00000602011 IGHV3-16A0A0C4DH30 117 aa12.01□□□□□ -0.49
SHKBP1-227ENST00000602011 SERTM2A0A1B0GWG4 89 aa12.01□□□□□ -0.49
SHKBP1-227ENST00000602011 SIX6O95475 246 aa12.01□□□□□ -0.49
SHKBP1-227ENST00000602011 SMR3BP02814 79 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-227ENST00000602011 HYLS1Q96M11 299 aa12.01□□□□□ -0.49
SHKBP1-227ENST00000602011 MED28Q9H204 178 aa12.01□□□□□ -0.49
SHKBP1-227ENST00000602011 A0A1W2PPV4 95 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 GATA1P15976 413 aaPredicted RBP12□□□□□ -0.49
SHKBP1-227ENST00000602011 PPT1P50897 306 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 HAMPP81172 84 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 ACOT6Q3I5F7 207 aaPredicted RBP12□□□□□ -0.49
SHKBP1-227ENST00000602011 NHLRC2Q8NBF2 726 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 PPP1R1CQ8WVI7 109 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 PRADC1Q9BSG0 188 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 TREM1Q9NP99 234 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 NAGKQ9UJ70 344 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 HSPB11Q9Y547 144 aa12□□□□□ -0.49
SHKBP1-227ENST00000602011 TRBV6-4A0A1B0GX49 114 aa11.99□□□□□ -0.49
SHKBP1-227ENST00000602011 GNRH2O43555 120 aa11.99□□□□□ -0.49
SHKBP1-227ENST00000602011 ASB13Q8WXK3 278 aa11.99□□□□□ -0.49
SHKBP1-227ENST00000602011 NDFIP1Q9BT67 221 aa11.99□□□□□ -0.49
SHKBP1-227ENST00000602011 SRRM2Q9UQ35 2752 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-227ENST00000602011 IGLV5-52A0A0A0MRZ9 124 aa11.98□□□□□ -0.49
SHKBP1-227ENST00000602011 FBLL1A6NHQ2 334 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-227ENST00000602011 C1QBP02746 253 aa11.98□□□□□ -0.49
SHKBP1-227ENST00000602011 RPL12P30050 165 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-227ENST00000602011 PTH2Q96A98 100 aa11.98□□□□□ -0.49
SHKBP1-227ENST00000602011 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
SHKBP1-227ENST00000602011 K7EQM0 130 aa11.97□□□□□ -0.49
SHKBP1-227ENST00000602011 MPC2O95563 127 aa11.97□□□□□ -0.49
SHKBP1-227ENST00000602011 RHOHQ15669 191 aa11.97□□□□□ -0.49
SHKBP1-227ENST00000602011 GOLT1AQ6ZVE7 132 aa11.97□□□□□ -0.49
SHKBP1-227ENST00000602011 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
SHKBP1-227ENST00000602011 TAAR5O14804 337 aa11.96□□□□□ -0.49
SHKBP1-227ENST00000602011 TYMSP04818 313 aa11.96□□□□□ -0.49
SHKBP1-227ENST00000602011 H2BFSP57053 126 aa11.96□□□□□ -0.49
SHKBP1-227ENST00000602011 ZNF876PQ49A33 203 aa11.96□□□□□ -0.49
SHKBP1-227ENST00000602011 LELP1Q5T871 98 aa11.96□□□□□ -0.49
SHKBP1-227ENST00000602011 LAGE3Q14657 143 aa11.95□□□□□ -0.5
SHKBP1-227ENST00000602011 OR10J3Q5JRS4 329 aa11.95□□□□□ -0.5
SHKBP1-227ENST00000602011 SLC25A29Q8N8R3 303 aa11.95□□□□□ -0.5
SHKBP1-227ENST00000602011 RS1O15537 224 aa11.94□□□□□ -0.5
SHKBP1-227ENST00000602011 MGST1P10620 155 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-227ENST00000602011 Q8N814 137 aa11.94□□□□□ -0.5
SHKBP1-227ENST00000602011 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
SHKBP1-227ENST00000602011 RPH3ALQ9UNE2 315 aa11.94□□□□□ -0.5
SHKBP1-227ENST00000602011 LOC100131303A0A0U1RQF7 123 aa11.93□□□□□ -0.5
SHKBP1-227ENST00000602011 PIK3CD-AS1Q5SR53 167 aa11.93□□□□□ -0.5
SHKBP1-227ENST00000602011 CFAP126Q5VTH2 177 aa11.93□□□□□ -0.5
SHKBP1-227ENST00000602011 Q6ZSN1 163 aa11.93□□□□□ -0.5
SHKBP1-227ENST00000602011 TVP23CQ96ET8 276 aa11.93□□□□□ -0.5
SHKBP1-227ENST00000602011 TOR2AQ5JU69 321 aa11.92□□□□□ -0.5
SHKBP1-227ENST00000602011 Q6ZNX1 250 aa11.92□□□□□ -0.5
SHKBP1-227ENST00000602011 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
SHKBP1-227ENST00000602011 OR10G9Q8NGN4 311 aa11.92□□□□□ -0.5
SHKBP1-227ENST00000602011 OR10G7Q8NGN6 311 aa11.92□□□□□ -0.5
SHKBP1-227ENST00000602011 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
SHKBP1-227ENST00000602011 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
SHKBP1-227ENST00000602011 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
SHKBP1-227ENST00000602011 GIPP09681 153 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-227ENST00000602011 ZFP69Q49AA0 526 aa11.91□□□□□ -0.5
SHKBP1-227ENST00000602011 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
SHKBP1-227ENST00000602011 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
SHKBP1-227ENST00000602011 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 F6UZH7 168 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 MBP02144 154 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 TCRAP04437 139 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 ZFP2Q6ZN57 461 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 SUN5Q8TC36 379 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 C9orf85Q96MD7 179 aa11.9□□□□□ -0.5
SHKBP1-227ENST00000602011 STAG3L2P0CL84 134 aa11.89□□□□□ -0.51
SHKBP1-227ENST00000602011 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
SHKBP1-227ENST00000602011 OR2G3Q8NGZ4 309 aa11.89□□□□□ -0.51
SHKBP1-227ENST00000602011 PSG8Q9UQ74 426 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms