RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 FAM231BA6NCW3 169 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 CXCL1P09341 107 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 S100PP25815 95 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 KCNIP4Q6PIL6 250 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 LINC01587Q99440 93 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 GFRA4Q9GZZ7 299 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 SMCO4Q9NRQ5 59 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 IL36BQ9NZH7 164 aa13.58□□□□□ -0.24
SSBP4-212ENST00000601919 IGKV3D-20A0A0C4DH25 116 aa13.57□□□□□ -0.24
SSBP4-212ENST00000601919 GIG44P09565 113 aaPredicted RBP13.57□□□□□ -0.24
SSBP4-212ENST00000601919 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
SSBP4-212ENST00000601919 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
SSBP4-212ENST00000601919 MUC21Q5SSG8 566 aa13.57□□□□□ -0.24
SSBP4-212ENST00000601919 LINC00467Q9BRT7 94 aa13.57□□□□□ -0.24
SSBP4-212ENST00000601919 TMSB15BA0A087X1C1 80 aa13.56□□□□□ -0.24
SSBP4-212ENST00000601919 RPL19P84098 196 aaKnown RBP13.56□□□□□ -0.24
SSBP4-212ENST00000601919 Q6ZQT7 251 aa13.56□□□□□ -0.24
SSBP4-212ENST00000601919 C11orf21Q9P2W6 132 aa13.56□□□□□ -0.24
SSBP4-212ENST00000601919 TRGV11A0A075B6L2 103 aa13.55□□□□□ -0.24
SSBP4-212ENST00000601919 A0A1W2PPQ1 181 aa13.55□□□□□ -0.24
SSBP4-212ENST00000601919 SMIM27A0A1W2PRY6 76 aa13.55□□□□□ -0.24
SSBP4-212ENST00000601919 NAT8BQ9UHF3 227 aa13.55□□□□□ -0.24
SSBP4-212ENST00000601919 CBY3A6NI87 242 aa13.54□□□□□ -0.24
SSBP4-212ENST00000601919 RBMY1A1P0DJD3 496 aaKnown RBP13.54□□□□□ -0.24
SSBP4-212ENST00000601919 RBMY1CP0DJD4 496 aa13.54□□□□□ -0.24
SSBP4-212ENST00000601919 S100A4P26447 101 aaKnown RBP13.54□□□□□ -0.24
SSBP4-212ENST00000601919 ASIPP42127 132 aa13.54□□□□□ -0.24
SSBP4-212ENST00000601919 RBMY1FQ15415 496 aaKnown RBP13.54□□□□□ -0.24
SSBP4-212ENST00000601919 C1orf158Q8N1D5 194 aa13.54□□□□□ -0.24
SSBP4-212ENST00000601919 CSNK1G2-AS1Q8NCQ2 148 aa13.54□□□□□ -0.24
SSBP4-212ENST00000601919 BTF3L4Q96K17 158 aa13.54□□□□□ -0.24
SSBP4-212ENST00000601919 TRAV9-1A0A075B6T8 112 aa13.53□□□□□ -0.24
SSBP4-212ENST00000601919 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
SSBP4-212ENST00000601919 DNLZQ5SXM8 178 aa13.53□□□□□ -0.24
SSBP4-212ENST00000601919 NEU1Q99519 415 aa13.53□□□□□ -0.24
SSBP4-212ENST00000601919 CMYA5Q8N3K9 4069 aa13.53□□□□□ -0.24
SSBP4-212ENST00000601919 MGAM2Q2M2H8 2515 aa13.52□□□□□ -0.24
SSBP4-212ENST00000601919 GRIFINA4D1Z8 144 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 HIGD1CA8MV81 97 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 F2Z2F3 143 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 TYMSP04818 313 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 FRMD6-AS1P0C7T7 363 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 GZMBP10144 247 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 HTN1P15515 57 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 FOXA3P55318 350 aaPredicted RBP13.52□□□□□ -0.25
SSBP4-212ENST00000601919 TCL1AP56279 114 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 Q6ZWC4 215 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 FER1L6-AS1Q8NA97 138 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 BORCS7Q96B45 105 aa13.52□□□□□ -0.25
SSBP4-212ENST00000601919 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
SSBP4-212ENST00000601919 ZNF705AQ6ZN79 300 aaPredicted RBP13.51□□□□□ -0.25
SSBP4-212ENST00000601919 GTSF1Q8WW33 167 aa13.51□□□□□ -0.25
SSBP4-212ENST00000601919 RCHY1Q96PM5 261 aa13.51□□□□□ -0.25
SSBP4-212ENST00000601919 URGCP-MRPS24S4R325 110 aa13.51□□□□□ -0.25
SSBP4-212ENST00000601919 GNRH2O43555 120 aa13.5□□□□□ -0.25
SSBP4-212ENST00000601919 SCO1O75880 301 aa13.5□□□□□ -0.25
SSBP4-212ENST00000601919 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
SSBP4-212ENST00000601919 CBLN2Q8IUK8 224 aa13.5□□□□□ -0.25
SSBP4-212ENST00000601919 TPPP3Q9BW30 176 aa13.5□□□□□ -0.25
SSBP4-212ENST00000601919 IGHV3-16A0A0C4DH30 117 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 SMIM9A6NGZ8 99 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 K7EIL1 84 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 PRB2P02812 416 aaPredicted RBP13.49□□□□□ -0.25
SSBP4-212ENST00000601919 IGLC6P0CF74 106 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 FAM3BP58499 235 aaPredicted RBP13.49□□□□□ -0.25
SSBP4-212ENST00000601919 ZNF415Q09FC8 603 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 RRN3P1Q2M238 152 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 ZNF493Q6ZR52 646 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 NUP35Q8NFH5 326 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 PGLYRP4Q96LB8 373 aa13.49□□□□□ -0.25
SSBP4-212ENST00000601919 H3BVH4 76 aa13.48□□□□□ -0.25
SSBP4-212ENST00000601919 CTRLP40313 264 aa13.48□□□□□ -0.25
SSBP4-212ENST00000601919 DEFB135Q30KP9 77 aa13.48□□□□□ -0.25
SSBP4-212ENST00000601919 DEFB121Q5J5C9 76 aa13.48□□□□□ -0.25
SSBP4-212ENST00000601919 ZNF575Q86XF7 245 aa13.48□□□□□ -0.25
SSBP4-212ENST00000601919 C16orf74Q96GX8 76 aa13.48□□□□□ -0.25
SSBP4-212ENST00000601919 TP53TG3Q9ULZ0 132 aa13.48□□□□□ -0.25
SSBP4-212ENST00000601919 NOTCH1P46531 2555 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 A0A1B0GUT8 65 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 SNAI2O43623 268 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 ARMS2P0C7Q2 107 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 CACNG7P62955 275 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 ELOBQ15370 118 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 WDR73Q6P4I2 378 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 LYZL1Q6UWQ5 148 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 TMEM263Q8WUH6 116 aaKnown RBP13.47□□□□□ -0.25
SSBP4-212ENST00000601919 RNF183Q96D59 192 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 SSBP4Q9BWG4 385 aaPredicted RBP13.47□□□□□ -0.25
SSBP4-212ENST00000601919 TP53TG1Q9Y2A0 90 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 PHLDA3Q9Y5J5 127 aa13.47□□□□□ -0.25
SSBP4-212ENST00000601919 TIMM8BQ9Y5J9 83 aaPredicted RBP13.47□□□□□ -0.25
SSBP4-212ENST00000601919 SPRY2O43597 315 aa13.46□□□□□ -0.25
SSBP4-212ENST00000601919 RNASE3P12724 160 aaKnown RBP13.46□□□□□ -0.25
SSBP4-212ENST00000601919 RIGQ13278 110 aa13.46□□□□□ -0.25
SSBP4-212ENST00000601919 ATP5L2Q7Z4Y8 100 aa13.46□□□□□ -0.25
SSBP4-212ENST00000601919 TRBV24-1A0A075B6N3 115 aa13.45□□□□□ -0.26
SSBP4-212ENST00000601919 A0A1B0GW15 77 aa13.45□□□□□ -0.26
SSBP4-212ENST00000601919 S100A8P05109 93 aa13.45□□□□□ -0.26
SSBP4-212ENST00000601919 C9orf85Q96MD7 179 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms