RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 MAP1LC3BQ9GZQ8 125 aa15.68■□□□□ 0.1
CCDC9-204ENST00000599398 A0A096LPF7 62 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 IGHV3-16A0A0C4DH30 117 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 NBDYA0A0U1RRE5 68 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 HMSDA8MTL9 139 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 GCGP01275 180 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 IGLV2-11P01706 119 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 TYMSP04818 313 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 ESRGQ1W209 222 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 PRO0255Q9UI72 69 aa15.67■□□□□ 0.1
CCDC9-204ENST00000599398 TRGV4A0A0C4DH28 118 aa15.66■□□□□ 0.1
CCDC9-204ENST00000599398 FBLL1A6NHQ2 334 aaKnown RBP15.66■□□□□ 0.1
CCDC9-204ENST00000599398 SFTA3P0C7M3 94 aa15.66■□□□□ 0.1
CCDC9-204ENST00000599398 ZNF80P51504 273 aaPredicted RBP15.66■□□□□ 0.1
CCDC9-204ENST00000599398 SLAQ13239 276 aa15.66■□□□□ 0.1
CCDC9-204ENST00000599398 SMUG1Q53HV7 270 aa15.66■□□□□ 0.1
CCDC9-204ENST00000599398 RASL10AQ92737 203 aa15.66■□□□□ 0.1
CCDC9-204ENST00000599398 HHLA3Q9XRX5 114 aa15.66■□□□□ 0.1
CCDC9-204ENST00000599398 DNAH17Q9UFH2 4485 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 TRAV34A0A0B4J273 112 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 A0A0D9SG52 128 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 KANTRA0A1W2PQU2 76 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 FHL2Q14192 279 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 STOML3Q8TAV4 291 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 LINC00479Q96M42 142 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 ZNF471Q9BX82 626 aaPredicted RBP15.65■□□□□ 0.1
CCDC9-204ENST00000599398 NKX6-2Q9C056 277 aaPredicted RBP15.65■□□□□ 0.1
CCDC9-204ENST00000599398 Q9H8V8 135 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 ICOSQ9Y6W8 199 aa15.65■□□□□ 0.1
CCDC9-204ENST00000599398 FAT2Q9NYQ8 4349 aa15.64■□□□□ 0.1
CCDC9-204ENST00000599398 FAM74A7A6NL05 159 aa15.64■□□□□ 0.09
CCDC9-204ENST00000599398 M0R2P5 195 aa15.64■□□□□ 0.09
CCDC9-204ENST00000599398 PEX7O00628 323 aa15.64■□□□□ 0.09
CCDC9-204ENST00000599398 PFN1P07737 140 aaKnown RBP15.64■□□□□ 0.09
CCDC9-204ENST00000599398 FHITP49789 147 aa15.64■□□□□ 0.09
CCDC9-204ENST00000599398 PPT1P50897 306 aa15.64■□□□□ 0.09
CCDC9-204ENST00000599398 SAPCD1Q5SSQ6 148 aa15.64■□□□□ 0.09
CCDC9-204ENST00000599398 ZNF479Q96JC4 524 aa15.64■□□□□ 0.09
CCDC9-204ENST00000599398 BCL2L11O43521 198 aa15.63■□□□□ 0.09
CCDC9-204ENST00000599398 CRYBA4P53673 196 aa15.63■□□□□ 0.09
CCDC9-204ENST00000599398 C11orf21Q9P2W6 132 aa15.63■□□□□ 0.09
CCDC9-204ENST00000599398 MRPS16Q9Y3D3 137 aaKnown RBP15.63■□□□□ 0.09
CCDC9-204ENST00000599398 ARL2-SNX15V9GYD0 113 aa15.62■□□□□ 0.09
CCDC9-204ENST00000599398 PFDN1O60925 122 aa15.61■□□□□ 0.09
CCDC9-204ENST00000599398 SEC11BP0C7V7 166 aa15.61■□□□□ 0.09
CCDC9-204ENST00000599398 CST9LP1Q5W188 147 aa15.61■□□□□ 0.09
CCDC9-204ENST00000599398 OR4C5Q8NGB2 326 aa15.61■□□□□ 0.09
CCDC9-204ENST00000599398 FAM213BQ8TBF2 198 aa15.61■□□□□ 0.09
CCDC9-204ENST00000599398 HIST1H2BAQ96A08 127 aa15.61■□□□□ 0.09
CCDC9-204ENST00000599398 UPK3BQ9BT76 320 aa15.61■□□□□ 0.09
CCDC9-204ENST00000599398 TRAV4A0A0B4J268 109 aa15.6■□□□□ 0.09
CCDC9-204ENST00000599398 A0A1B0GVY2 172 aa15.6■□□□□ 0.09
CCDC9-204ENST00000599398 UMAD1C9J7I0 102 aa15.59■□□□□ 0.09
CCDC9-204ENST00000599398 C9JCJ5 164 aa15.59■□□□□ 0.09
CCDC9-204ENST00000599398 EIF5AP63241 154 aaKnown RBP15.59■□□□□ 0.09
CCDC9-204ENST00000599398 MRPL23Q16540 153 aaKnown RBP15.59■□□□□ 0.09
CCDC9-204ENST00000599398 Q86TA4 180 aa15.59■□□□□ 0.09
CCDC9-204ENST00000599398 C6orf223Q8N319 242 aa15.59■□□□□ 0.09
CCDC9-204ENST00000599398 SFT2D1Q8WV19 159 aa15.59■□□□□ 0.09
CCDC9-204ENST00000599398 A0A1B0GV50 99 aa15.58■□□□□ 0.08
CCDC9-204ENST00000599398 TTC32Q5I0X7 151 aa15.58■□□□□ 0.08
CCDC9-204ENST00000599398 TMUB2Q71RG4 321 aa15.58■□□□□ 0.08
CCDC9-204ENST00000599398 PCNPQ8WW12 178 aaKnown RBP15.58■□□□□ 0.08
CCDC9-204ENST00000599398 UBE2G1P62253 170 aa15.57■□□□□ 0.08
CCDC9-204ENST00000599398 ZNF876PQ49A33 203 aa15.57■□□□□ 0.08
CCDC9-204ENST00000599398 FABP5P3A8MUU1 101 aa15.56■□□□□ 0.08
CCDC9-204ENST00000599398 TPT1P13693 172 aaKnown RBP15.56■□□□□ 0.08
CCDC9-204ENST00000599398 GYPEP15421 78 aa15.56■□□□□ 0.08
CCDC9-204ENST00000599398 SRIP30626 198 aa15.56■□□□□ 0.08
CCDC9-204ENST00000599398 NEGR1Q7Z3B1 354 aa15.56■□□□□ 0.08
CCDC9-204ENST00000599398 K7EQD1 137 aa15.55■□□□□ 0.08
CCDC9-204ENST00000599398 PAGE4O60829 102 aa15.55■□□□□ 0.08
CCDC9-204ENST00000599398 ORM1P02763 201 aa15.55■□□□□ 0.08
CCDC9-204ENST00000599398 MBD3L1Q8WWY6 194 aa15.55■□□□□ 0.08
CCDC9-204ENST00000599398 FMC1Q96HJ9 113 aa15.55■□□□□ 0.08
CCDC9-204ENST00000599398 PKHD1P08F94 4074 aa15.54■□□□□ 0.08
CCDC9-204ENST00000599398 S100A4P26447 101 aaKnown RBP15.54■□□□□ 0.08
CCDC9-204ENST00000599398 DPPA3Q6W0C5 159 aa15.54■□□□□ 0.08
CCDC9-204ENST00000599398 C9orf85Q96MD7 179 aa15.54■□□□□ 0.08
CCDC9-204ENST00000599398 TCEAL7Q9BRU2 100 aa15.54■□□□□ 0.08
CCDC9-204ENST00000599398 KRTAP1-5Q9BYS1 174 aa15.54■□□□□ 0.08
CCDC9-204ENST00000599398 ZFP30Q9Y2G7 519 aa15.54■□□□□ 0.08
CCDC9-204ENST00000599398 IGKV3D-20A0A0C4DH25 116 aa15.53■□□□□ 0.08
CCDC9-204ENST00000599398 NXPH4O95158 308 aa15.53■□□□□ 0.08
CCDC9-204ENST00000599398 H2AFB1P0C5Y9 115 aa15.53■□□□□ 0.08
CCDC9-204ENST00000599398 RNASE3P12724 160 aaKnown RBP15.53■□□□□ 0.08
CCDC9-204ENST00000599398 AKR1C3P42330 323 aa15.53■□□□□ 0.08
CCDC9-204ENST00000599398 LYPD5Q6UWN5 251 aa15.53■□□□□ 0.08
CCDC9-204ENST00000599398 ZC2HC1AQ96GY0 325 aa15.53■□□□□ 0.08
CCDC9-204ENST00000599398 SIVA1O15304 175 aa15.52■□□□□ 0.08
CCDC9-204ENST00000599398 TNP2Q05952 138 aa15.52■□□□□ 0.08
CCDC9-204ENST00000599398 A0A1W2PPQ1 181 aa15.51■□□□□ 0.07
CCDC9-204ENST00000599398 PGPEP1LA6NFU8 196 aa15.51■□□□□ 0.07
CCDC9-204ENST00000599398 B4DEV8 164 aa15.51■□□□□ 0.07
CCDC9-204ENST00000599398 ASIPP42127 132 aa15.51■□□□□ 0.07
CCDC9-204ENST00000599398 ZNF506Q5JVG8 444 aa15.51■□□□□ 0.07
CCDC9-204ENST00000599398 CFAP126Q5VTH2 177 aa15.51■□□□□ 0.07
CCDC9-204ENST00000599398 TXNDC17Q9BRA2 123 aa15.51■□□□□ 0.07
CCDC9-204ENST00000599398 IGHV3-73A0A0B4J1V6 119 aa15.5■□□□□ 0.07
CCDC9-204ENST00000599398 LOC100131303A0A0U1RQF7 123 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 210.1 ms