RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GFI1BQ5VTD9 330 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 TMEM14CQ9P0S9 112 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 FAT2Q9NYQ8 4349 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 IGLV2-18A0A075B6J9 118 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 LYRM9A8MSI8 78 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 ERCC8Q13216 396 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 TMEM256Q8N2U0 113 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 BLNKQ8WV28 456 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 FAM210BQ96KR6 192 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 PYGO2Q9BRQ0 406 aa9.7□□□□□ -0.86
SCAF1-203ENST00000598359 PPP1R2P9O14990 202 aa9.69□□□□□ -0.86
SCAF1-203ENST00000598359 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
SCAF1-203ENST00000598359 OR10J4P0C629 311 aa9.69□□□□□ -0.86
SCAF1-203ENST00000598359 EXOC3-AS1Q8N2X6 119 aa9.69□□□□□ -0.86
SCAF1-203ENST00000598359 NOP10Q9NPE3 64 aaKnown RBP9.69□□□□□ -0.86
SCAF1-203ENST00000598359 TRAV12-3A0A0B4J271 114 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 NPIPB6E9PJ23 425 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 F5H768 121 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 H7BYZ3 331 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 CXCL1P09341 107 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 HIST1H1EP10412 219 aaKnown RBP9.68□□□□□ -0.86
SCAF1-203ENST00000598359 RAB5BP61020 215 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 RNASE8Q8TDE3 154 aaKnown RBP9.68□□□□□ -0.86
SCAF1-203ENST00000598359 C16orf74Q96GX8 76 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
SCAF1-203ENST00000598359 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
SCAF1-203ENST00000598359 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
SCAF1-203ENST00000598359 TIMM8BQ9Y5J9 83 aaPredicted RBP9.67□□□□□ -0.86
SCAF1-203ENST00000598359 IGKV2-40A0A087WW87 121 aaPredicted RBP9.66□□□□□ -0.86
SCAF1-203ENST00000598359 ZNF253O75346 499 aa9.66□□□□□ -0.86
SCAF1-203ENST00000598359 IGKV2D-40P01614 121 aaPredicted RBP9.66□□□□□ -0.86
SCAF1-203ENST00000598359 NBEAP1P0C6P0 100 aa9.66□□□□□ -0.86
SCAF1-203ENST00000598359 LEPP41159 167 aa9.66□□□□□ -0.86
SCAF1-203ENST00000598359 OCC1Q8TAD7 63 aa9.66□□□□□ -0.86
SCAF1-203ENST00000598359 TMEM263Q8WUH6 116 aaKnown RBP9.66□□□□□ -0.86
SCAF1-203ENST00000598359 AGPAT4-IT1Q9H0P7 198 aa9.66□□□□□ -0.86
SCAF1-203ENST00000598359 TGIF2-C20orf24A0A0A6YYL0 155 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 CBY3A6NI87 242 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 K7EN84 100 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 RTL8CO15255 209 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 NUDT3O95989 172 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 ATP5G1P05496 136 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 S100PP25815 95 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 ZNF493Q6ZR52 646 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 MRPL53Q96EL3 112 aaKnown RBP9.65□□□□□ -0.86
SCAF1-203ENST00000598359 SMIM12Q96EX1 92 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 BTF3L4Q96K17 158 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 PKHD1P08F94 4074 aa9.65□□□□□ -0.86
SCAF1-203ENST00000598359 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 GAGE12BA1L429 117 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 PEX7O00628 323 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 GAGE7O76087 117 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 GCGP01275 180 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 IGLV2-8P01709 118 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 TYMSP04818 313 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 GAGE12FP0CL80 117 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 GAGE12GP0CL81 117 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 GAGE12IP0CL82 117 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 GNG4P50150 75 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 PDE6HQ13956 83 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 Q6ZQT7 251 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 C15orf53Q8NAA6 179 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 C5orf17Q8NAS9 161 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 ODF3Q96PU9 254 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 VGLL1Q99990 258 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 BIN3Q9NQY0 253 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 URGCP-MRPS24S4R325 110 aa9.64□□□□□ -0.87
SCAF1-203ENST00000598359 C7orf71A4D174 169 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
SCAF1-203ENST00000598359 RNASE4P34096 147 aaKnown RBP9.63□□□□□ -0.87
SCAF1-203ENST00000598359 RPS10P46783 165 aaKnown RBP9.63□□□□□ -0.87
SCAF1-203ENST00000598359 TMEM183BQ1AE95 376 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 LGALS9BQ3B8N2 356 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 PRR9Q5T870 116 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 KCNIP4Q6PIL6 250 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 Q6ZR54 194 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 OR10G8Q8NGN5 311 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 FAM19A4Q96LR4 140 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 ATG101Q9BSB4 218 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 AAMDCQ9H7C9 122 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 OTORQ9NRC9 128 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
SCAF1-203ENST00000598359 NACAE9PAV3 2078 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 OR5I1Q13606 314 aa9.62□□□□□ -0.87
SCAF1-203ENST00000598359 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms