RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 A0A096LPF7 62 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 IGLV5-52A0A0A0MRZ9 124 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 TRBV7-9A0A0J9YWB2 115 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 NXPH4O95158 308 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 CXorf1O96002 111 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 ANXA2RQ3ZCQ2 193 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 RPL7L1Q6DKI1 246 aaKnown RBP10.49□□□□□ -0.73
LIG1-214ENST00000597146 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 LINC00528Q8N1L1 170 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 TMEM167BQ9NRX6 74 aa10.49□□□□□ -0.73
LIG1-214ENST00000597146 TAAR5O14804 337 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 ARPC5O15511 151 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 GCHFRP30047 84 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 AKR1C8PQ5T2L2 129 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 Q6ZTI0 123 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 SH3BGRL3Q9H299 93 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 KLF12Q9Y4X4 402 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 LENEPQ9Y5L5 61 aa10.48□□□□□ -0.73
LIG1-214ENST00000597146 H3BNG1 76 aa10.47□□□□□ -0.73
LIG1-214ENST00000597146 STAG3L2P0CL84 134 aa10.47□□□□□ -0.73
LIG1-214ENST00000597146 STAG3L3P0CL85 134 aa10.47□□□□□ -0.73
LIG1-214ENST00000597146 SUMO1P63165 101 aaKnown RBP10.47□□□□□ -0.73
LIG1-214ENST00000597146 ZNF415Q09FC8 603 aa10.47□□□□□ -0.73
LIG1-214ENST00000597146 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
LIG1-214ENST00000597146 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
LIG1-214ENST00000597146 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
LIG1-214ENST00000597146 IFNA7P01567 189 aa10.46□□□□□ -0.73
LIG1-214ENST00000597146 IBA57Q5T440 356 aaKnown RBP10.46□□□□□ -0.73
LIG1-214ENST00000597146 PRR9Q5T870 116 aa10.46□□□□□ -0.73
LIG1-214ENST00000597146 TMED6Q8WW62 240 aa10.46□□□□□ -0.73
LIG1-214ENST00000597146 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
LIG1-214ENST00000597146 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
LIG1-214ENST00000597146 TMPRSS5Q9H3S3 457 aa10.46□□□□□ -0.73
LIG1-214ENST00000597146 TP53TG3Q9ULZ0 132 aa10.46□□□□□ -0.73
LIG1-214ENST00000597146 TRGV11A0A075B6L2 103 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 RNF222A6NCQ9 220 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 TCL1AP56279 114 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 GNG5P63218 68 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 TMEM183BQ1AE95 376 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 C5orf17Q8NAS9 161 aa10.45□□□□□ -0.74
LIG1-214ENST00000597146 PKHD1L1Q86WI1 4243 aa10.44□□□□□ -0.74
LIG1-214ENST00000597146 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
LIG1-214ENST00000597146 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
LIG1-214ENST00000597146 Q6ZQT7 251 aa10.44□□□□□ -0.74
LIG1-214ENST00000597146 C11orf72Q8NBR9 251 aa10.44□□□□□ -0.74
LIG1-214ENST00000597146 SGK494Q96LW2 274 aa10.44□□□□□ -0.74
LIG1-214ENST00000597146 MRPL16Q9NX20 251 aaKnown RBP10.44□□□□□ -0.74
LIG1-214ENST00000597146 TRAV8-1A0A0A6YYK1 113 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 CTXND1A0A1B0GTU2 59 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 SMLR1H3BR10 107 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 SPINK4O60575 86 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 ZFP69Q49AA0 526 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 STOML3Q8TAV4 291 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 SPXQ9BT56 116 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
LIG1-214ENST00000597146 TRGV4A0A0C4DH28 118 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 F6UZH7 168 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 PAX4O43316 350 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 TCRAP04437 139 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 PPT1P50897 306 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 UBE2G2P60604 165 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 SLAQ13239 276 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 Q6AWC8 147 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 PRNTQ86SH4 94 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 KCNS1Q96KK3 526 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 SDF2L1Q9HCN8 221 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
LIG1-214ENST00000597146 OXTP01178 125 aa10.41□□□□□ -0.74
LIG1-214ENST00000597146 PSG8Q9UQ74 426 aa10.41□□□□□ -0.74
LIG1-214ENST00000597146 A0A0D9SG52 128 aa10.4□□□□□ -0.74
LIG1-214ENST00000597146 KANTRA0A1W2PQU2 76 aa10.4□□□□□ -0.74
LIG1-214ENST00000597146 A0A1W2PRE2 83 aa10.4□□□□□ -0.74
LIG1-214ENST00000597146 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
LIG1-214ENST00000597146 GNRH2O43555 120 aa10.4□□□□□ -0.74
LIG1-214ENST00000597146 FGF8P55075 233 aaPredicted RBP10.4□□□□□ -0.74
LIG1-214ENST00000597146 FLI1Q01543 452 aaPredicted RBP10.4□□□□□ -0.74
LIG1-214ENST00000597146 SAPCD1Q5SSQ6 148 aa10.4□□□□□ -0.74
LIG1-214ENST00000597146 CYB561D1Q8N8Q1 229 aa10.4□□□□□ -0.74
LIG1-214ENST00000597146 NKX6-2Q9C056 277 aaPredicted RBP10.4□□□□□ -0.74
LIG1-214ENST00000597146 HHLA3Q9XRX5 114 aa10.4□□□□□ -0.74
LIG1-214ENST00000597146 PFDN1O60925 122 aa10.39□□□□□ -0.75
LIG1-214ENST00000597146 KRTAP10-4P60372 401 aaPredicted RBP10.39□□□□□ -0.75
LIG1-214ENST00000597146 EIF5AP63241 154 aaKnown RBP10.39□□□□□ -0.75
LIG1-214ENST00000597146 SMUG1Q53HV7 270 aa10.39□□□□□ -0.75
LIG1-214ENST00000597146 SUN5Q8TC36 379 aa10.39□□□□□ -0.75
LIG1-214ENST00000597146 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
LIG1-214ENST00000597146 ZNF471Q9BX82 626 aaPredicted RBP10.39□□□□□ -0.75
LIG1-214ENST00000597146 LY96Q9Y6Y9 160 aa10.39□□□□□ -0.75
LIG1-214ENST00000597146 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 LRCOL1A6NCL2 159 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 GCGP01275 180 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 CST9LP1Q5W188 147 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms