RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 HIST1H2BAQ96A08 127 aa12.27□□□□□ -0.45
SHKBP1-203ENST00000594298 PSG8Q9UQ74 426 aa12.27□□□□□ -0.45
SHKBP1-203ENST00000594298 ARL2-SNX15V9GYD0 113 aa12.27□□□□□ -0.45
SHKBP1-203ENST00000594298 TRAV21A0A0B4J279 112 aa12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 F5H768 121 aa12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 H2AFB1P0C5Y9 115 aa12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 FLI1Q01543 452 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 SAPCD1Q5SSQ6 148 aa12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 C6orf223Q8N319 242 aa12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
SHKBP1-203ENST00000594298 C16orf90A8MZG2 172 aa12.25□□□□□ -0.45
SHKBP1-203ENST00000594298 TEX46H3BTG2 121 aa12.25□□□□□ -0.45
SHKBP1-203ENST00000594298 CCL18P55774 89 aa12.25□□□□□ -0.45
SHKBP1-203ENST00000594298 ZFP69Q49AA0 526 aa12.25□□□□□ -0.45
SHKBP1-203ENST00000594298 CST9LP1Q5W188 147 aa12.25□□□□□ -0.45
SHKBP1-203ENST00000594298 SGK494Q96LW2 274 aa12.25□□□□□ -0.45
SHKBP1-203ENST00000594298 GSN-AS1Q9NRJ2 163 aa12.25□□□□□ -0.45
SHKBP1-203ENST00000594298 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
SHKBP1-203ENST00000594298 PEX7O00628 323 aa12.24□□□□□ -0.45
SHKBP1-203ENST00000594298 NUDT3O95989 172 aa12.24□□□□□ -0.45
SHKBP1-203ENST00000594298 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
SHKBP1-203ENST00000594298 PRNTQ86SH4 94 aa12.24□□□□□ -0.45
SHKBP1-203ENST00000594298 TCL1AP56279 114 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 SMUG1Q53HV7 270 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 C11orf72Q8NBR9 251 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 TVP23CQ96ET8 276 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 KCNS1Q96KK3 526 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 LINC00588Q9Y4M8 146 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
SHKBP1-203ENST00000594298 GAGE12BA1L429 117 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 GAGE7O76087 117 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 IGLV2-11P01706 119 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 GAGE12FP0CL80 117 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 GAGE12GP0CL81 117 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 GAGE12IP0CL82 117 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 Q6ZQT7 251 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
SHKBP1-203ENST00000594298 TRGV2A0A075B6R0 118 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 A0A1B0GV50 99 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 PAGE4O60829 102 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 SULT1A2P50226 295 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 TDRG1Q3Y452 100 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 C9orf62Q8N4C0 152 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 SPXQ9BT56 116 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.45
SHKBP1-203ENST00000594298 TRGV1A0A0A0MS02 117 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 TRAV1-1A0A0B4J248 108 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 SPINK4O60575 86 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 GCGP01275 180 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 UBE2G1P62253 170 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 TMEM183BQ1AE95 376 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 TMEM183AQ8IXX5 376 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 FMC1Q96HJ9 113 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 C18orf15Q96N68 181 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 SDF2L1Q9HCN8 221 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 ZFP30Q9Y2G7 519 aa12.2□□□□□ -0.46
SHKBP1-203ENST00000594298 TRAV34A0A0B4J273 112 aa12.19□□□□□ -0.46
SHKBP1-203ENST00000594298 S100A9P06702 114 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-203ENST00000594298 PFN1P07737 140 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-203ENST00000594298 Q6ZTI0 123 aa12.19□□□□□ -0.46
SHKBP1-203ENST00000594298 LINC00479Q96M42 142 aa12.19□□□□□ -0.46
SHKBP1-203ENST00000594298 C8orf49Q96NF6 230 aa12.19□□□□□ -0.46
SHKBP1-203ENST00000594298 A0A1B0GVG6 124 aa12.18□□□□□ -0.46
SHKBP1-203ENST00000594298 AKR1C3P42330 323 aa12.18□□□□□ -0.46
SHKBP1-203ENST00000594298 OR5I1Q13606 314 aa12.18□□□□□ -0.46
SHKBP1-203ENST00000594298 MAPKAPK5-AS1Q8N8E1 139 aa12.18□□□□□ -0.46
SHKBP1-203ENST00000594298 Q9H8V8 135 aa12.18□□□□□ -0.46
SHKBP1-203ENST00000594298 MANBALQ9NQG1 85 aa12.18□□□□□ -0.46
SHKBP1-203ENST00000594298 TRBV6-1A0A0K0K1D8 114 aa12.17□□□□□ -0.46
SHKBP1-203ENST00000594298 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
SHKBP1-203ENST00000594298 Q86TA4 180 aa12.17□□□□□ -0.46
SHKBP1-203ENST00000594298 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
SHKBP1-203ENST00000594298 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
SHKBP1-203ENST00000594298 GNRH2O43555 120 aa12.16□□□□□ -0.46
SHKBP1-203ENST00000594298 ZNF80P51504 273 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-203ENST00000594298 TTC32Q5I0X7 151 aa12.16□□□□□ -0.46
SHKBP1-203ENST00000594298 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
SHKBP1-203ENST00000594298 IFNA1P01562 189 aa12.15□□□□□ -0.46
SHKBP1-203ENST00000594298 TYMSP04818 313 aa12.15□□□□□ -0.46
SHKBP1-203ENST00000594298 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
SHKBP1-203ENST00000594298 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-203ENST00000594298 GNG13Q9P2W3 67 aa12.15□□□□□ -0.46
SHKBP1-203ENST00000594298 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 H3BNG1 76 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 M0R2P5 195 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 BTF3P20290 206 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 SLAQ13239 276 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 Q8N1X5 172 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 RASL10AQ92737 203 aa12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 APOBP04114 4563 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-203ENST00000594298 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
SHKBP1-203ENST00000594298 CCL20P78556 96 aa12.13□□□□□ -0.47
SHKBP1-203ENST00000594298 KRTAP1-5Q9BYS1 174 aa12.13□□□□□ -0.47
SHKBP1-203ENST00000594298 LTAP01374 205 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms