RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, human

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-219	ENST00000589349	MUC21	Q5SSG8	566 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	C1orf134	Q5TEV5	83 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349		Q6ZTI0	123 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	LINC00336	Q6ZUF6	198 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	EIF4E3	Q8N5X7	224 aa	Known RBP	5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	HSD17B11	Q8NBQ5	300 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	OR10G4	Q8NGN3	311 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	OR10G9	Q8NGN4	311 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	OR10G7	Q8NGN6	311 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	FXYD5	Q96DB9	178 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	PHYHIPL	Q96FC7	376 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	FAM167A-AS1	Q96KT0	104 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	ODF3	Q96PU9	254 aa		5.76	□□□□□ -1.49
DNMT1-219	ENST00000589349	FXYD6-FXYD2	A0A087WZ82	144 aa		5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	RAB2A	P61019	212 aa		5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	SSX7	Q7RTT5	188 aa		5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	RXFP4	Q8TDU9	374 aa		5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	WFDC1	Q9HC57	220 aa		5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	MRPL16	Q9NX20	251 aa	Known RBP	5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	PAM16	Q9Y3D7	125 aa		5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	KLF12	Q9Y4X4	402 aa		5.75	□□□□□ -1.49
DNMT1-219	ENST00000589349	IGHV1OR15-1	A0A075B7D0	117 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	PTTG1	O95997	202 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	ZNF415	Q09FC8	603 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	ZNF266	Q14584	549 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	LGALS9B	Q3B8N2	356 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	FAM159A	Q6UWV7	190 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	GOLT1A	Q6ZVE7	132 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	OTOR	Q9NRC9	128 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	ZNF492	Q9P255	531 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	TP53TG3	Q9ULZ0	132 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	SACS	Q9NZJ4	4579 aa		5.74	□□□□□ -1.49
DNMT1-219	ENST00000589349	PCLO	Q9Y6V0	5065 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349		A0A096LPF7	62 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	BORCS7-ASMT	A0A0B4J1R7	106 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	TRGV4	A0A0C4DH28	118 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	KLLN	B2CW77	178 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	CDC34	P49427	236 aa	Predicted RBP	5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	DAZ2	Q13117	558 aa	Known RBP	5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	TMEM183B	Q1AE95	376 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	PQLC2	Q6ZP29	291 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349		Q6ZQT7	251 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	TMEM183A	Q8IXX5	376 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	LYPD1	Q8N2G4	141 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	SGK494	Q96LW2	274 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	NDFIP1	Q9BT67	221 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	LINC00588	Q9Y4M8	146 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	ALMS1	Q8TCU4	4167 aa		5.73	□□□□□ -1.49
DNMT1-219	ENST00000589349	RYR1	P21817	5038 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349		F6UZH7	168 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349		K7EQM0	130 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	ZNF324	O75467	553 aa	Predicted RBP	5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	MB	P02144	154 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	NMB	P08949	121 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	ARL14EPL	P0DKL9	152 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	CRISP2	P16562	243 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	GNG5	P63218	68 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	PRR9	Q5T870	116 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	ZFAND2A	Q8N6M9	145 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	PCNP	Q8WW12	178 aa	Known RBP	5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349		Q9H8V8	135 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	TREM1	Q9NP99	234 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	HYDIN	Q4G0P3	5121 aa		5.72	□□□□□ -1.49
DNMT1-219	ENST00000589349	NBDY	A0A0U1RRE5	68 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	RBAKDN	A6NC62	111 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	RTL8C	O15255	209 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	IFNA7	P01567	189 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	ATP6V0C	P27449	155 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	TCL1A	P56279	114 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	RGS21	Q2M5E4	152 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	PRNT	Q86SH4	94 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	C6orf223	Q8N319	242 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	OR2T35	Q8NGX2	323 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	OR2G3	Q8NGZ4	309 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	SH3BGRL3	Q9H299	93 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	ICOS	Q9Y6W8	199 aa		5.71	□□□□□ -1.5
DNMT1-219	ENST00000589349	TRAV8-1	A0A0A6YYK1	113 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	TRAV21	A0A0B4J279	112 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349		C9JCJ5	164 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	SPINK4	O60575	86 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	CXorf1	O96002	111 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	GIP	P09681	153 aa	Predicted RBP	5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	SFTA3	P0C7M3	94 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	GCHFR	P30047	84 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	PLEC	Q15149	4684 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	ESRG	Q1W209	222 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	ZFP69	Q49AA0	526 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349		Q5BKY6	102 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	AKR1C8P	Q5T2L2	129 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	IBA57	Q5T440	356 aa	Known RBP	5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	C11orf72	Q8NBR9	251 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	ZNRF2	Q8NHG8	242 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	TMED6	Q8WW62	240 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	FAM19A4	Q96LR4	140 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	SDF2L1	Q9HCN8	221 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	MDFIC	Q9P1T7	246 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	HHLA3	Q9XRX5	114 aa		5.7	□□□□□ -1.5
DNMT1-219	ENST00000589349	DNAH1	Q9P2D7	4330 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms