RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TPPP3Q9BW30 176 aa8.44□□□□□ -1.06
SMAD4-205ENST00000588745 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
SMAD4-205ENST00000588745 NAGKQ9UJ70 344 aa8.44□□□□□ -1.06
SMAD4-205ENST00000588745 A0A1B0GW15 77 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BKO60814 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BJP06899 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 TRGC1P0CF51 173 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BOP23527 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BBP33778 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 CAMPP49913 170 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BDP58876 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 RAB4BP61018 213 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BCP62807 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 RIGQ13278 110 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST2H2BEQ16778 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.43□□□□□ -1.06
SMAD4-205ENST00000588745 LYZL1Q6UWQ5 148 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 SPATA3Q8NHX4 192 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BHQ93079 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 CLUHP3Q96NS8 147 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BNQ99877 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 HIST1H2BMQ99879 126 aa8.43□□□□□ -1.06
SMAD4-205ENST00000588745 AGRNO00468 2067 aa8.42□□□□□ -1.06
SMAD4-205ENST00000588745 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
SMAD4-205ENST00000588745 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
SMAD4-205ENST00000588745 S100A8P05109 93 aa8.42□□□□□ -1.06
SMAD4-205ENST00000588745 ANXA2RQ3ZCQ2 193 aa8.42□□□□□ -1.06
SMAD4-205ENST00000588745 MUC21Q5SSG8 566 aa8.42□□□□□ -1.06
SMAD4-205ENST00000588745 MCRIP2Q9BUT9 160 aaKnown RBP8.42□□□□□ -1.06
SMAD4-205ENST00000588745 SORL1Q92673 2214 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-205ENST00000588745 CD7P09564 240 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 SHISA2Q6UWI4 295 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 C12orf54Q6X4T0 127 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
SMAD4-205ENST00000588745 STHQ8IWL8 128 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 C3orf56Q8N813 242 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 GATD1Q8NB37 220 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 KCNS1Q96KK3 526 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 CNFNQ9BYD5 112 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 C19orf73Q9NVV2 129 aa8.41□□□□□ -1.06
SMAD4-205ENST00000588745 F2Z2F3 143 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 CRXO43186 299 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-205ENST00000588745 SNAI2O43623 268 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 S100A6P06703 90 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 OR5AL1P0C617 328 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 ASIPP42127 132 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 FXYD7P58549 80 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 SLAQ13239 276 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 DNLZQ5SXM8 178 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 FAM159AQ6UWV7 190 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 WFDC9Q8NEX5 89 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 TMEM158Q8WZ71 300 aa8.4□□□□□ -1.06
SMAD4-205ENST00000588745 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-205ENST00000588745 H3BVH4 76 aa8.39□□□□□ -1.07
SMAD4-205ENST00000588745 APCSP02743 223 aa8.39□□□□□ -1.07
SMAD4-205ENST00000588745 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
SMAD4-205ENST00000588745 IGHV1OR15-1A0A075B7D0 117 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 MUC21A0A0G2JKD1 596 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 MUC21A0A140T8X8 626 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 INSP01308 110 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 AMBPP02760 352 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 RBMY1A1P0DJD3 496 aaKnown RBP8.38□□□□□ -1.07
SMAD4-205ENST00000588745 RBMY1CP0DJD4 496 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 S100A4P26447 101 aaKnown RBP8.38□□□□□ -1.07
SMAD4-205ENST00000588745 CACNG7P62955 275 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 RBMY1FQ15415 496 aaKnown RBP8.38□□□□□ -1.07
SMAD4-205ENST00000588745 ZNF493Q6ZR52 646 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 OR10AG1Q8NH19 301 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 WFDC10AQ9H1F0 79 aa8.38□□□□□ -1.07
SMAD4-205ENST00000588745 LOC105371267A0A1B0GV96 52 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 GNRH2O43555 120 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 NTF3P20783 257 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 NDUFA6P56556 154 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 SNRPEP62304 92 aaKnown RBP8.37□□□□□ -1.07
SMAD4-205ENST00000588745 TWIST1Q15672 202 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 KIAA1644Q3SXP7 199 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 PRR31Q5SQ13 230 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 GTSCR1Q86UQ5 136 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 C20orf144Q9BQM9 153 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 VWFP04275 2813 aa8.37□□□□□ -1.07
SMAD4-205ENST00000588745 IGHV4-4A0A075B6R2 117 aa8.36□□□□□ -1.07
SMAD4-205ENST00000588745 C5orf52A6NGY3 159 aa8.36□□□□□ -1.07
SMAD4-205ENST00000588745 WIPF1O43516 503 aa8.36□□□□□ -1.07
SMAD4-205ENST00000588745 RNASE3P12724 160 aaKnown RBP8.36□□□□□ -1.07
SMAD4-205ENST00000588745 IGLL1P15814 213 aa8.36□□□□□ -1.07
SMAD4-205ENST00000588745 SSTP61278 116 aa8.36□□□□□ -1.07
SMAD4-205ENST00000588745 NUTF2P61970 127 aaKnown RBP8.36□□□□□ -1.07
SMAD4-205ENST00000588745 SPANXN1Q5VSR9 72 aa8.36□□□□□ -1.07
SMAD4-205ENST00000588745 FBN1P35555 2871 aaKnown RBP8.36□□□□□ -1.07
SMAD4-205ENST00000588745 TRGV11A0A075B6L2 103 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 LOC102724200A0A096LPH7 203 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-205ENST00000588745 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 SRIP30626 198 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 Q8N1Y9 231 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 TMEM191AQ9H0A3 160 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 MSRB1Q9NZV6 116 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 TP53TG3Q9ULZ0 132 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms