RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 FHL2Q14192 279 aa13.18□□□□□ -0.3
TPM4-204ENST00000586499 CYB561D1Q8N8Q1 229 aa13.18□□□□□ -0.3
TPM4-204ENST00000586499 SPXQ9BT56 116 aa13.18□□□□□ -0.3
TPM4-204ENST00000586499 NDFIP1Q9BT67 221 aa13.18□□□□□ -0.3
TPM4-204ENST00000586499 C11orf21Q9P2W6 132 aa13.18□□□□□ -0.3
TPM4-204ENST00000586499 PKD1P98161 4303 aa13.18□□□□□ -0.3
TPM4-204ENST00000586499 PAX4O43316 350 aa13.17□□□□□ -0.3
TPM4-204ENST00000586499 GCGP01275 180 aa13.17□□□□□ -0.3
TPM4-204ENST00000586499 FHITP49789 147 aa13.17□□□□□ -0.3
TPM4-204ENST00000586499 C1orf134Q5TEV5 83 aa13.17□□□□□ -0.3
TPM4-204ENST00000586499 RASL10AQ92737 203 aa13.17□□□□□ -0.3
TPM4-204ENST00000586499 ZNF479Q96JC4 524 aa13.17□□□□□ -0.3
TPM4-204ENST00000586499 Q9H8V8 135 aa13.17□□□□□ -0.3
TPM4-204ENST00000586499 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 HMSDA8MTL9 139 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 IFNA7P01567 189 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 CRYBA4P53673 196 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 ZNF345Q14585 488 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 TMEM75Q8N9X5 138 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 MAP1LC3BQ9GZQ8 125 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 PRO0255Q9UI72 69 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 HHLA3Q9XRX5 114 aa13.16□□□□□ -0.3
TPM4-204ENST00000586499 FAM74A7A6NL05 159 aa13.15□□□□□ -0.3
TPM4-204ENST00000586499 KCNS1Q96KK3 526 aa13.15□□□□□ -0.3
TPM4-204ENST00000586499 SDF2L1Q9HCN8 221 aa13.15□□□□□ -0.3
TPM4-204ENST00000586499 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
TPM4-204ENST00000586499 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
TPM4-204ENST00000586499 M0R2P5 195 aa13.13□□□□□ -0.31
TPM4-204ENST00000586499 PEX7O00628 323 aa13.13□□□□□ -0.31
TPM4-204ENST00000586499 SOHLH1Q5JUK2 328 aa13.13□□□□□ -0.31
TPM4-204ENST00000586499 ZNF471Q9BX82 626 aaPredicted RBP13.13□□□□□ -0.31
TPM4-204ENST00000586499 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
TPM4-204ENST00000586499 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
TPM4-204ENST00000586499 A0A0D9SG52 128 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 BCL2L11O43521 198 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 PFN1P07737 140 aaKnown RBP13.12□□□□□ -0.31
TPM4-204ENST00000586499 SLAQ13239 276 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 ZFP69Q49AA0 526 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 UPK3BQ9BT76 320 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 KRTAP1-5Q9BYS1 174 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 ICOSQ9Y6W8 199 aa13.12□□□□□ -0.31
TPM4-204ENST00000586499 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
TPM4-204ENST00000586499 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
TPM4-204ENST00000586499 C9JCJ5 164 aa13.11□□□□□ -0.31
TPM4-204ENST00000586499 SEC11BP0C7V7 166 aa13.11□□□□□ -0.31
TPM4-204ENST00000586499 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
TPM4-204ENST00000586499 NKX6-2Q9C056 277 aaPredicted RBP13.11□□□□□ -0.31
TPM4-204ENST00000586499 TRAV4A0A0B4J268 109 aa13.1□□□□□ -0.31
TPM4-204ENST00000586499 C6orf223Q8N319 242 aa13.1□□□□□ -0.31
TPM4-204ENST00000586499 STOML3Q8TAV4 291 aa13.1□□□□□ -0.31
TPM4-204ENST00000586499 FAM213BQ8TBF2 198 aa13.1□□□□□ -0.31
TPM4-204ENST00000586499 PKHD1P08F94 4074 aa13.1□□□□□ -0.31
TPM4-204ENST00000586499 A0A1B0GV50 99 aa13.09□□□□□ -0.31
TPM4-204ENST00000586499 PPT1P50897 306 aa13.09□□□□□ -0.31
TPM4-204ENST00000586499 CST9LP1Q5W188 147 aa13.09□□□□□ -0.31
TPM4-204ENST00000586499 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
TPM4-204ENST00000586499 Q86TA4 180 aa13.09□□□□□ -0.31
TPM4-204ENST00000586499 SFT2D1Q8WV19 159 aa13.09□□□□□ -0.31
TPM4-204ENST00000586499 HIST1H2BAQ96A08 127 aa13.09□□□□□ -0.31
TPM4-204ENST00000586499 DYNC1H1Q14204 4646 aaKnown RBP13.08□□□□□ -0.32
TPM4-204ENST00000586499 IGKV3D-20A0A0C4DH25 116 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 K7EQD1 137 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 CRIP1P50238 77 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 TNP2Q05952 138 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 MRPL23Q16540 153 aaKnown RBP13.08□□□□□ -0.32
TPM4-204ENST00000586499 ZNF876PQ49A33 203 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 LYPD5Q6UWN5 251 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 DPPA3Q6W0C5 159 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 MBD3L1Q8WWY6 194 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 C9orf85Q96MD7 179 aa13.08□□□□□ -0.32
TPM4-204ENST00000586499 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
TPM4-204ENST00000586499 PAGE4O60829 102 aa13.07□□□□□ -0.32
TPM4-204ENST00000586499 PFDN1O60925 122 aa13.07□□□□□ -0.32
TPM4-204ENST00000586499 RNASE3P12724 160 aaKnown RBP13.07□□□□□ -0.32
TPM4-204ENST00000586499 GYPEP15421 78 aa13.07□□□□□ -0.32
TPM4-204ENST00000586499 DNAH11Q96DT5 4516 aa13.07□□□□□ -0.32
TPM4-204ENST00000586499 LOC100131303A0A0U1RQF7 123 aa13.06□□□□□ -0.32
TPM4-204ENST00000586499 PGPEP1LA6NFU8 196 aa13.06□□□□□ -0.32
TPM4-204ENST00000586499 FABP5P3A8MUU1 101 aa13.06□□□□□ -0.32
TPM4-204ENST00000586499 NEGR1Q7Z3B1 354 aa13.06□□□□□ -0.32
TPM4-204ENST00000586499 ZC2HC1AQ96GY0 325 aa13.06□□□□□ -0.32
TPM4-204ENST00000586499 NXPH4O95158 308 aa13.05□□□□□ -0.32
TPM4-204ENST00000586499 SRIP30626 198 aa13.05□□□□□ -0.32
TPM4-204ENST00000586499 IGHV3-73A0A0B4J1V6 119 aa13.04□□□□□ -0.32
TPM4-204ENST00000586499 SIVA1O15304 175 aa13.04□□□□□ -0.32
TPM4-204ENST00000586499 UBE2G1P62253 170 aa13.04□□□□□ -0.32
TPM4-204ENST00000586499 LGALSLQ3ZCW2 172 aaPredicted RBP13.04□□□□□ -0.32
TPM4-204ENST00000586499 TTC32Q5I0X7 151 aa13.04□□□□□ -0.32
TPM4-204ENST00000586499 ZNF506Q5JVG8 444 aa13.04□□□□□ -0.32
TPM4-204ENST00000586499 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
TPM4-204ENST00000586499 PCNPQ8WW12 178 aaKnown RBP13.04□□□□□ -0.32
TPM4-204ENST00000586499 FMC1Q96HJ9 113 aa13.04□□□□□ -0.32
TPM4-204ENST00000586499 M0R036 132 aa13.03□□□□□ -0.32
TPM4-204ENST00000586499 RS1O15537 224 aa13.03□□□□□ -0.32
TPM4-204ENST00000586499 ORM1P02763 201 aa13.03□□□□□ -0.32
TPM4-204ENST00000586499 H2AFB1P0C5Y9 115 aa13.03□□□□□ -0.32
TPM4-204ENST00000586499 TPT1P13693 172 aaKnown RBP13.03□□□□□ -0.32
TPM4-204ENST00000586499 GATA1P15976 413 aaPredicted RBP13.03□□□□□ -0.32
TPM4-204ENST00000586499 EIF5AP63241 154 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms