RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	SERTM2	A0A1B0GWG4	89 aa		11.44	□□□□□ -0.58
CIRBP-204	ENST00000585630	TDRG1	Q3Y452	100 aa		11.44	□□□□□ -0.58
CIRBP-204	ENST00000585630	C5orf17	Q8NAS9	161 aa		11.44	□□□□□ -0.58
CIRBP-204	ENST00000585630	MBD3L1	Q8WWY6	194 aa		11.44	□□□□□ -0.58
CIRBP-204	ENST00000585630	UPK3B	Q9BT76	320 aa		11.44	□□□□□ -0.58
CIRBP-204	ENST00000585630	PKD1	P98161	4303 aa		11.44	□□□□□ -0.58
CIRBP-204	ENST00000585630		A0A096LPF7	62 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	MAP1LC3B2	A6NCE7	125 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	H2AFB1	P0C5Y9	115 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	FGF8	P55075	233 aa	Predicted RBP	11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	BLOC1S1	P78537	153 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	TMEM183B	Q1AE95	376 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	FAM159A	Q6UWV7	190 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	TMEM183A	Q8IXX5	376 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	PCNP	Q8WW12	178 aa	Known RBP	11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	TVP23C	Q96ET8	276 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	MAP1LC3B	Q9GZQ8	125 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	TMEM167B	Q9NRX6	74 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	MDFIC	Q9P1T7	246 aa		11.43	□□□□□ -0.58
CIRBP-204	ENST00000585630	GGTLC3	B5MD39	225 aa		11.42	□□□□□ -0.58
CIRBP-204	ENST00000585630		F6UZH7	168 aa		11.42	□□□□□ -0.58
CIRBP-204	ENST00000585630	SGK494	Q96LW2	274 aa		11.42	□□□□□ -0.58
CIRBP-204	ENST00000585630	TREM1	Q9NP99	234 aa		11.42	□□□□□ -0.58
CIRBP-204	ENST00000585630	NAGK	Q9UJ70	344 aa		11.42	□□□□□ -0.58
CIRBP-204	ENST00000585630	MRPS16	Q9Y3D3	137 aa	Known RBP	11.42	□□□□□ -0.58
CIRBP-204	ENST00000585630	TRAV21	A0A0B4J279	112 aa		11.41	□□□□□ -0.58
CIRBP-204	ENST00000585630	IGHV3-53	P01767	116 aa		11.41	□□□□□ -0.58
CIRBP-204	ENST00000585630	TCRA	P04437	139 aa		11.41	□□□□□ -0.58
CIRBP-204	ENST00000585630	SUMO1	P63165	101 aa	Known RBP	11.41	□□□□□ -0.58
CIRBP-204	ENST00000585630	ESRG	Q1W209	222 aa		11.41	□□□□□ -0.58
CIRBP-204	ENST00000585630	SFT2D1	Q8WV19	159 aa		11.41	□□□□□ -0.58
CIRBP-204	ENST00000585630	SPX	Q9BT56	116 aa		11.41	□□□□□ -0.58
CIRBP-204	ENST00000585630	TRAV1-1	A0A0B4J248	108 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630		A0A1B0GV50	99 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630	UBE2G2	P60604	165 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630	TTC32	Q5I0X7	151 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630	C6orf223	Q8N319	242 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630	NDFIP1	Q9BT67	221 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630		Q9H8V8	135 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630	PRO0255	Q9UI72	69 aa		11.4	□□□□□ -0.58
CIRBP-204	ENST00000585630		K7EQM0	130 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	PAX4	O43316	350 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	RAB14	P61106	215 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	SLA	Q13239	276 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	CLLU1	Q5K131	121 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	CYB561D1	Q8N8Q1	229 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	RASL10A	Q92737	203 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	KRTAP1-5	Q9BYS1	174 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	ICOS	Q9Y6W8	199 aa		11.39	□□□□□ -0.59
CIRBP-204	ENST00000585630	IGHV3-16	A0A0C4DH30	117 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630		A0A1W2PRE2	83 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	TEX46	H3BTG2	121 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	IGLV2-11	P01706	119 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	TYMS	P04818	313 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	CRYBA4	P53673	196 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	FHL2	Q14192	279 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	LYPD6B	Q8NI32	183 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	SDF2L1	Q9HCN8	221 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	EPDR1	Q9UM22	224 aa		11.38	□□□□□ -0.59
CIRBP-204	ENST00000585630	CCL20	P78556	96 aa		11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630	FLI1	Q01543	452 aa	Predicted RBP	11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630	TMEM75	Q8N9X5	138 aa		11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630	KCNS1	Q96KK3	526 aa		11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630	C8orf49	Q96NF6	230 aa		11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630	PSG8	Q9UQ74	426 aa		11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630	HHLA3	Q9XRX5	114 aa		11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630	HERC2	O95714	4834 aa		11.37	□□□□□ -0.59
CIRBP-204	ENST00000585630		A0A1W2PPQ1	181 aa		11.36	□□□□□ -0.59
CIRBP-204	ENST00000585630	FBLL1	A6NHQ2	334 aa	Known RBP	11.36	□□□□□ -0.59
CIRBP-204	ENST00000585630		M0R2P5	195 aa		11.36	□□□□□ -0.59
CIRBP-204	ENST00000585630	SFTA3	P0C7M3	94 aa		11.36	□□□□□ -0.59
CIRBP-204	ENST00000585630	ZNF479	Q96JC4	524 aa		11.36	□□□□□ -0.59
CIRBP-204	ENST00000585630	TRAV4	A0A0B4J268	109 aa		11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	TRGV4	A0A0C4DH28	118 aa		11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	FAM74A7	A6NL05	159 aa		11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	GNRH2	O43555	120 aa		11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	GCG	P01275	180 aa		11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	ZNF80	P51504	273 aa	Predicted RBP	11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	TNP2	Q05952	138 aa		11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	PRNT	Q86SH4	94 aa		11.35	□□□□□ -0.59
CIRBP-204	ENST00000585630	KIAA1109	Q2LD37	5005 aa		11.34	□□□□□ -0.59
CIRBP-204	ENST00000585630	PFN1	P07737	140 aa	Known RBP	11.34	□□□□□ -0.59
CIRBP-204	ENST00000585630	MED14OS	P0DP75	135 aa		11.34	□□□□□ -0.59
CIRBP-204	ENST00000585630	MRPL23	Q16540	153 aa	Known RBP	11.34	□□□□□ -0.59
CIRBP-204	ENST00000585630	LINC00479	Q96M42	142 aa		11.34	□□□□□ -0.59
CIRBP-204	ENST00000585630	C11orf21	Q9P2W6	132 aa		11.34	□□□□□ -0.59
CIRBP-204	ENST00000585630	TRAV34	A0A0B4J273	112 aa		11.33	□□□□□ -0.6
CIRBP-204	ENST00000585630	PPT1	P50897	306 aa		11.33	□□□□□ -0.6
CIRBP-204	ENST00000585630	SMUG1	Q53HV7	270 aa		11.33	□□□□□ -0.6
CIRBP-204	ENST00000585630	GNG13	Q9P2W3	67 aa		11.33	□□□□□ -0.6
CIRBP-204	ENST00000585630	DNAH11	Q96DT5	4516 aa		11.33	□□□□□ -0.6
CIRBP-204	ENST00000585630		K7EQD1	137 aa		11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630	PEX7	O00628	323 aa		11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630	NXPH4	O95158	308 aa		11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630	BTF3	P20290	206 aa	Known RBP	11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630	SAPCD1	Q5SSQ6	148 aa		11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630	CST9LP1	Q5W188	147 aa		11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630		Q86TA4	180 aa		11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630	NKX6-2	Q9C056	277 aa	Predicted RBP	11.32	□□□□□ -0.6
CIRBP-204	ENST00000585630		C9JCJ5	164 aa		11.31	□□□□□ -0.6

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