RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 IGHV3-53P01767 116 aa17.36■□□□□ 0.37
TTC39C-209ENST00000584250 TYMSP04818 313 aa17.36■□□□□ 0.37
TTC39C-209ENST00000584250 EIF5AP63241 154 aaKnown RBP17.36■□□□□ 0.37
TTC39C-209ENST00000584250 CST9LP1Q5W188 147 aa17.36■□□□□ 0.37
TTC39C-209ENST00000584250 C15orf53Q8NAA6 179 aa17.36■□□□□ 0.37
TTC39C-209ENST00000584250 ARL2-SNX15V9GYD0 113 aa17.36■□□□□ 0.37
TTC39C-209ENST00000584250 IGHV3-16A0A0C4DH30 117 aa17.35■□□□□ 0.37
TTC39C-209ENST00000584250 C18orf15Q96N68 181 aa17.35■□□□□ 0.37
TTC39C-209ENST00000584250 EPPK1P58107 5090 aaKnown RBP17.34■□□□□ 0.37
TTC39C-209ENST00000584250 TRGV11A0A075B6L2 103 aa17.34■□□□□ 0.37
TTC39C-209ENST00000584250 ZFP69Q49AA0 526 aa17.34■□□□□ 0.37
TTC39C-209ENST00000584250 Q86TA4 180 aa17.34■□□□□ 0.37
TTC39C-209ENST00000584250 H2AFB1P0C5Y9 115 aa17.33■□□□□ 0.36
TTC39C-209ENST00000584250 CCL20P78556 96 aa17.33■□□□□ 0.36
TTC39C-209ENST00000584250 LGALS9BQ3B8N2 356 aa17.33■□□□□ 0.36
TTC39C-209ENST00000584250 SMUG1Q53HV7 270 aa17.33■□□□□ 0.36
TTC39C-209ENST00000584250 DPPA3Q6W0C5 159 aa17.33■□□□□ 0.36
TTC39C-209ENST00000584250 UBE2DNLQ8IWF7 75 aa17.33■□□□□ 0.36
TTC39C-209ENST00000584250 VSIG2Q96IQ7 327 aa17.33■□□□□ 0.36
TTC39C-209ENST00000584250 NKX6-2Q9C056 277 aaPredicted RBP17.33■□□□□ 0.36
TTC39C-209ENST00000584250 C9orf62Q8N4C0 152 aa17.32■□□□□ 0.36
TTC39C-209ENST00000584250 HIST1H2BAQ96A08 127 aa17.32■□□□□ 0.36
TTC39C-209ENST00000584250 PFN1P07737 140 aaKnown RBP17.31■□□□□ 0.36
TTC39C-209ENST00000584250 SAPCD1Q5SSQ6 148 aa17.31■□□□□ 0.36
TTC39C-209ENST00000584250 IGLV2-18A0A075B6J9 118 aa17.3■□□□□ 0.36
TTC39C-209ENST00000584250 FBLL1A6NHQ2 334 aaKnown RBP17.3■□□□□ 0.36
TTC39C-209ENST00000584250 M0R2N4 97 aa17.3■□□□□ 0.36
TTC39C-209ENST00000584250 SFTA3P0C7M3 94 aa17.3■□□□□ 0.36
TTC39C-209ENST00000584250 SDF2L1Q9HCN8 221 aa17.3■□□□□ 0.36
TTC39C-209ENST00000584250 CRIP1P50238 77 aa17.29■□□□□ 0.36
TTC39C-209ENST00000584250 PPT1P50897 306 aa17.29■□□□□ 0.36
TTC39C-209ENST00000584250 ZC2HC1AQ96GY0 325 aa17.29■□□□□ 0.36
TTC39C-209ENST00000584250 SPXQ9BT56 116 aa17.29■□□□□ 0.36
TTC39C-209ENST00000584250 FHL2Q14192 279 aa17.28■□□□□ 0.36
TTC39C-209ENST00000584250 RNF212Q495C1 297 aa17.28■□□□□ 0.36
TTC39C-209ENST00000584250 RASL10AQ92737 203 aa17.28■□□□□ 0.36
TTC39C-209ENST00000584250 ZNF479Q96JC4 524 aa17.28■□□□□ 0.36
TTC39C-209ENST00000584250 KCNS1Q96KK3 526 aa17.28■□□□□ 0.36
TTC39C-209ENST00000584250 DNAH10Q8IVF4 4471 aa17.27■□□□□ 0.36
TTC39C-209ENST00000584250 IGKV3D-20A0A0C4DH25 116 aa17.27■□□□□ 0.36
TTC39C-209ENST00000584250 SCO2A0A1W2PP80 73 aa17.27■□□□□ 0.36
TTC39C-209ENST00000584250 SULT1A2P50226 295 aa17.27■□□□□ 0.36
TTC39C-209ENST00000584250 SLC51BQ86UW2 128 aa17.27■□□□□ 0.36
TTC39C-209ENST00000584250 LINC00588Q9Y4M8 146 aa17.27■□□□□ 0.36
TTC39C-209ENST00000584250 M0R2P5 195 aa17.25■□□□□ 0.35
TTC39C-209ENST00000584250 AKR1C3P42330 323 aa17.25■□□□□ 0.35
TTC39C-209ENST00000584250 UBE2G1P62253 170 aa17.25■□□□□ 0.35
TTC39C-209ENST00000584250 FMC1Q96HJ9 113 aa17.25■□□□□ 0.35
TTC39C-209ENST00000584250 TRAV1-1A0A0B4J248 108 aa17.24■□□□□ 0.35
TTC39C-209ENST00000584250 RNASE3P12724 160 aaKnown RBP17.24■□□□□ 0.35
TTC39C-209ENST00000584250 NKX2-5P52952 324 aaPredicted RBP17.24■□□□□ 0.35
TTC39C-209ENST00000584250 NHLRC2Q8NBF2 726 aa17.24■□□□□ 0.35
TTC39C-209ENST00000584250 GNG13Q9P2W3 67 aa17.24■□□□□ 0.35
TTC39C-209ENST00000584250 A0A096LPF7 62 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 H3BNG1 76 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 LTAP01374 205 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 RAB5CP51148 216 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 EIF5AL1Q6IS14 154 aaKnown RBP17.23■□□□□ 0.35
TTC39C-209ENST00000584250 C9orf85Q96MD7 179 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 TCEAL7Q9BRU2 100 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 ZFP30Q9Y2G7 519 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 FRAS1Q86XX4 4008 aa17.23■□□□□ 0.35
TTC39C-209ENST00000584250 TRBV6-1A0A0K0K1D8 114 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 FABP5P3A8MUU1 101 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 C9JCJ5 164 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 SH2D1AO60880 128 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 CRYBA4P53673 196 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 ESRGQ1W209 222 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 COX8CQ7Z4L0 72 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 ZNRF2Q8NHG8 242 aa17.22■□□□□ 0.35
TTC39C-209ENST00000584250 PAX4O43316 350 aa17.21■□□□□ 0.35
TTC39C-209ENST00000584250 Q6ZR54 194 aa17.21■□□□□ 0.35
TTC39C-209ENST00000584250 ZNF575Q86XF7 245 aa17.21■□□□□ 0.35
TTC39C-209ENST00000584250 HHLA3Q9XRX5 114 aa17.21■□□□□ 0.35
TTC39C-209ENST00000584250 BOLA1Q9Y3E2 137 aa17.21■□□□□ 0.35
TTC39C-209ENST00000584250 PGPEP1LA6NFU8 196 aa17.2■□□□□ 0.34
TTC39C-209ENST00000584250 M0R036 132 aa17.2■□□□□ 0.34
TTC39C-209ENST00000584250 CCL18P55774 89 aa17.2■□□□□ 0.34
TTC39C-209ENST00000584250 PRO0255Q9UI72 69 aa17.2■□□□□ 0.34
TTC39C-209ENST00000584250 TRAV4A0A0B4J268 109 aa17.19■□□□□ 0.34
TTC39C-209ENST00000584250 TRGV4A0A0C4DH28 118 aa17.19■□□□□ 0.34
TTC39C-209ENST00000584250 ORM1P02763 201 aa17.19■□□□□ 0.34
TTC39C-209ENST00000584250 DERL1Q9BUN8 251 aa17.19■□□□□ 0.34
TTC39C-209ENST00000584250 ZNF674Q2M3X9 581 aa17.18■□□□□ 0.34
TTC39C-209ENST00000584250 ZNF876PQ49A33 203 aa17.18■□□□□ 0.34
TTC39C-209ENST00000584250 OR4C5Q8NGB2 326 aa17.18■□□□□ 0.34
TTC39C-209ENST00000584250 MANBALQ9NQG1 85 aa17.18■□□□□ 0.34
TTC39C-209ENST00000584250 GRIFINA4D1Z8 144 aa17.17■□□□□ 0.34
TTC39C-209ENST00000584250 KRBOX1C9JBD0 128 aa17.17■□□□□ 0.34
TTC39C-209ENST00000584250 ZNF506Q5JVG8 444 aa17.17■□□□□ 0.34
TTC39C-209ENST00000584250 ALKAL2Q6UX46 152 aa17.17■□□□□ 0.34
TTC39C-209ENST00000584250 B4DEV8 164 aa17.16■□□□□ 0.34
TTC39C-209ENST00000584250 FAM3BP58499 235 aaPredicted RBP17.16■□□□□ 0.34
TTC39C-209ENST00000584250 FAM162BQ5T6X4 162 aa17.16■□□□□ 0.34
TTC39C-209ENST00000584250 TMSB15BA0A087X1C1 80 aa17.15■□□□□ 0.34
TTC39C-209ENST00000584250 LOC100131303A0A0U1RQF7 123 aa17.15■□□□□ 0.34
TTC39C-209ENST00000584250 RTL8CO15255 209 aa17.15■□□□□ 0.34
TTC39C-209ENST00000584250 MLST8Q9BVC4 326 aa17.15■□□□□ 0.34
TTC39C-209ENST00000584250 BIRC6Q9NR09 4857 aa17.15■□□□□ 0.34
TTC39C-209ENST00000584250 H3BVH4 76 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms