RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MRPL36Q9P0J6 103 aaKnown RBP0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 JPT1Q9UK76 154 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 HIGD1AQ9Y241 93 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 ARAP1Q96P48 1450 aa0.61□□□□□ -2.31
PPP4R1-227ENST00000583988 ATG2AQ2TAZ0 1938 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 SPAG17Q6Q759 2223 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 ZDBF2Q9HCK1 2354 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 A0A0G2JMM0 328 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 HIGD1CA8MV81 97 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 CDC42EP2O14613 210 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 RBP4P02753 201 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 MT-ND4LP03901 98 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 ADCYAP1P18509 176 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 EVI2AP22794 236 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 KDELR1P24390 212 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 SPINT3P49223 89 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 POLR2JP52435 117 aaKnown RBP0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 QRFPP83859 136 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 CSAG1Q6PB30 78 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 DMAC1Q96GE9 116 aa0.6□□□□□ -2.31
PPP4R1-227ENST00000583988 APOC1P02654 83 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 IL7P13232 177 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 HLA-DRB4P13762 266 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 SPINK13Q1W4C9 94 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 MORN2Q502X0 79 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 TMEM244Q5VVB8 128 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 LYPD5Q6UWN5 251 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 TMEM91Q6ZNR0 172 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 MMGT1Q8N4V1 131 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 ATG5Q9H1Y0 275 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 TAS2R8Q9NYW2 309 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 HLA-DRB4X5D2U9 266 aa0.59□□□□□ -2.31
PPP4R1-227ENST00000583988 KNTC1P50748 2209 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 KDM5CP41229 1560 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 TRAV2A0A0B4J234 112 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 K7EIL1 84 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 ZNF137PP52743 207 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 Q5XG85 94 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 C10orf99Q6UWK7 81 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 PPP1R1CQ8WVI7 109 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 PPDPFLQ8WWR9 84 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 GSKIPQ9P0R6 139 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 COMMD3Q9UBI1 195 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 TRPM7Q96QT4 1865 aa0.58□□□□□ -2.32
PPP4R1-227ENST00000583988 PTPRGP23470 1445 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 ARHGAP31Q2M1Z3 1444 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 TRBV10-1A0A0K0K1A3 114 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 A0A1B0GW64 132 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 IGKCP01834 107 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 CD3DP04234 171 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 AKR1D1P51857 326 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 NCS1P62166 190 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 IQCJQ1A5X6 159 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 SPATA8Q6RVD6 105 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 HELZP42694 1942 aaKnown RBP0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 BCORL1Q5H9F3 1711 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 CCDC171Q6TFL3 1326 aa0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 VIRMAQ69YN4 1812 aaKnown RBP0.57□□□□□ -2.32
PPP4R1-227ENST00000583988 CTTNBP2Q8WZ74 1663 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 UHRF1BP1LA0JNW5 1464 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 CDK12Q9NYV4 1490 aaPredicted RBP0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 TRAV17A0A0B4J275 112 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 J3QR89 54 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 FXYD1O00168 92 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 FXYD3Q14802 87 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 ALX1Q15699 326 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 C6orf52Q5T4I8 152 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 SLC25A26Q70HW3 274 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 DEFB132Q7Z7B7 95 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 ATP6V0E2Q8NHE4 81 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 PLAC4Q8WY50 150 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 NOP16Q9Y3C1 178 aaKnown RBP0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 DNAJC15Q9Y5T4 150 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 WDR97A6NE52 1622 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 ARHGEF10O15013 1369 aa0.56□□□□□ -2.32
PPP4R1-227ENST00000583988 OVOS2A0A0J9YW53 1432 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 OVOS2Q6IE36 1432 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 KIDINS220Q9ULH0 1771 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 TEX49A0A1B0GTD5 131 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 LOC101927531A0A1B0GV80 90 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 CCKP06307 115 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 CKS1BP61024 79 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 CLLU1Q5K131 121 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 GLYATL3Q5SZD4 288 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 SNX29P2Q8IUI4 249 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 DYNLRB2Q8TF09 96 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 MAFIPQ8WZ33 124 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 C10orf95Q9H7T3 257 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 COA4Q9NYJ1 87 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 FHAD1B1AJZ9 1412 aa0.55□□□□□ -2.32
PPP4R1-227ENST00000583988 AFDNP55196 1824 aaKnown RBP0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 CCDC179H3BU77 68 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 J3QLW9 94 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 KLKP1Q107X0 134 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 ATP11AUNQ6ZP68 121 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 C5orf56Q8N8D9 126 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 LINC00208Q96KT6 92 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 SAR1AQ9NR31 198 aa0.54□□□□□ -2.32
PPP4R1-227ENST00000583988 ERG28Q9UKR5 140 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms