RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 LYPD5Q6UWN5 251 aa15.31■□□□□ 0.04
CASC3-207ENST00000581849 ZNF479Q96JC4 524 aa15.31■□□□□ 0.04
CASC3-207ENST00000581849 SDF2L1Q9HCN8 221 aa15.31■□□□□ 0.04
CASC3-207ENST00000581849 TMEM167BQ9NRX6 74 aa15.31■□□□□ 0.04
CASC3-207ENST00000581849 TNFSF18Q9UNG2 199 aa15.31■□□□□ 0.04
CASC3-207ENST00000581849 K7EQM0 130 aa15.3■□□□□ 0.04
CASC3-207ENST00000581849 TCRAP04437 139 aa15.3■□□□□ 0.04
CASC3-207ENST00000581849 GNG5P63218 68 aa15.3■□□□□ 0.04
CASC3-207ENST00000581849 PCNPQ8WW12 178 aaKnown RBP15.3■□□□□ 0.04
CASC3-207ENST00000581849 FBLL1A6NHQ2 334 aaKnown RBP15.29■□□□□ 0.04
CASC3-207ENST00000581849 F6UZH7 168 aa15.29■□□□□ 0.04
CASC3-207ENST00000581849 K7EP13 123 aa15.29■□□□□ 0.04
CASC3-207ENST00000581849 K7EQD1 137 aa15.29■□□□□ 0.04
CASC3-207ENST00000581849 TYMSP04818 313 aa15.29■□□□□ 0.04
CASC3-207ENST00000581849 SFTA3P0C7M3 94 aa15.29■□□□□ 0.04
CASC3-207ENST00000581849 SRIP30626 198 aa15.29■□□□□ 0.04
CASC3-207ENST00000581849 LINC00315P59091 139 aa15.29■□□□□ 0.04
CASC3-207ENST00000581849 GNRH2O43555 120 aa15.28■□□□□ 0.04
CASC3-207ENST00000581849 CXorf1O96002 111 aa15.28■□□□□ 0.04
CASC3-207ENST00000581849 Q6ZRN7 208 aaPredicted RBP15.28■□□□□ 0.04
CASC3-207ENST00000581849 SPATA12Q7Z6I5 190 aa15.28■□□□□ 0.04
CASC3-207ENST00000581849 INO80EQ8NBZ0 244 aaPredicted RBP15.28■□□□□ 0.04
CASC3-207ENST00000581849 ACTR3CQ9C0K3 210 aaPredicted RBP15.28■□□□□ 0.04
CASC3-207ENST00000581849 HSPG2P98160 4391 aa15.27■□□□□ 0.04
CASC3-207ENST00000581849 C9JCJ5 164 aa15.27■□□□□ 0.04
CASC3-207ENST00000581849 OR4C5Q8NGB2 326 aa15.27■□□□□ 0.04
CASC3-207ENST00000581849 TXNDC17Q9BRA2 123 aa15.27■□□□□ 0.04
CASC3-207ENST00000581849 GYPEP15421 78 aa15.26■□□□□ 0.03
CASC3-207ENST00000581849 Q5BKY6 102 aa15.26■□□□□ 0.03
CASC3-207ENST00000581849 SH2D6Q7Z4S9 175 aa15.26■□□□□ 0.03
CASC3-207ENST00000581849 TRAV9-2A0A087WT02 112 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 BORCS7-ASMTA0A0B4J1R7 106 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 RNF222A6NCQ9 220 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 TAAR5O14804 337 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 CIDEAO60543 219 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 CYB561D1Q8N8Q1 229 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 TMEM75Q8N9X5 138 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 SH3BGRL3Q9H299 93 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 EPDR1Q9UM22 224 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 PSG8Q9UQ74 426 aa15.25■□□□□ 0.03
CASC3-207ENST00000581849 A0A1W2PRE2 83 aa15.24■□□□□ 0.03
CASC3-207ENST00000581849 GGTLC3B5MD39 225 aa15.24■□□□□ 0.03
CASC3-207ENST00000581849 SUMO1P63165 101 aaKnown RBP15.24■□□□□ 0.03
CASC3-207ENST00000581849 FLI1Q01543 452 aaPredicted RBP15.24■□□□□ 0.03
CASC3-207ENST00000581849 ZFP69Q49AA0 526 aa15.24■□□□□ 0.03
CASC3-207ENST00000581849 NFE4Q86UQ8 179 aa15.24■□□□□ 0.03
CASC3-207ENST00000581849 IGLV2-11P01706 119 aa15.23■□□□□ 0.03
CASC3-207ENST00000581849 PFN1P07737 140 aaKnown RBP15.23■□□□□ 0.03
CASC3-207ENST00000581849 SAPCD1Q5SSQ6 148 aa15.23■□□□□ 0.03
CASC3-207ENST00000581849 PTH2Q96A98 100 aa15.23■□□□□ 0.03
CASC3-207ENST00000581849 SGK494Q96LW2 274 aa15.23■□□□□ 0.03
CASC3-207ENST00000581849 LY96Q9Y6Y9 160 aa15.23■□□□□ 0.03
CASC3-207ENST00000581849 GCGP01275 180 aa15.22■□□□□ 0.03
CASC3-207ENST00000581849 ZNF80P51504 273 aaPredicted RBP15.22■□□□□ 0.03
CASC3-207ENST00000581849 TIRAPP58753 221 aa15.22■□□□□ 0.03
CASC3-207ENST00000581849 SMUG1Q53HV7 270 aa15.22■□□□□ 0.03
CASC3-207ENST00000581849 RPL7L1Q6DKI1 246 aaKnown RBP15.22■□□□□ 0.03
CASC3-207ENST00000581849 ABCA13Q86UQ4 5058 aa15.22■□□□□ 0.03
CASC3-207ENST00000581849 FXYD6-FXYD2A0A087WZ82 144 aa15.21■□□□□ 0.03
CASC3-207ENST00000581849 CTXND1A0A1B0GTU2 59 aa15.21■□□□□ 0.03
CASC3-207ENST00000581849 DNAH10OSP0CZ25 163 aa15.21■□□□□ 0.03
CASC3-207ENST00000581849 GATA1P15976 413 aaPredicted RBP15.21■□□□□ 0.03
CASC3-207ENST00000581849 OR2T35Q8NGX2 323 aa15.21■□□□□ 0.03
CASC3-207ENST00000581849 KRTAP10-2P60368 255 aa15.2■□□□□ 0.02
CASC3-207ENST00000581849 ZNF876PQ49A33 203 aa15.2■□□□□ 0.02
CASC3-207ENST00000581849 C9orf85Q96MD7 179 aa15.2■□□□□ 0.02
CASC3-207ENST00000581849 C11orf21Q9P2W6 132 aa15.2■□□□□ 0.02
CASC3-207ENST00000581849 BOLA1Q9Y3E2 137 aa15.2■□□□□ 0.02
CASC3-207ENST00000581849 EVI2AP22794 236 aa15.19■□□□□ 0.02
CASC3-207ENST00000581849 PRNTQ86SH4 94 aa15.19■□□□□ 0.02
CASC3-207ENST00000581849 NKX6-2Q9C056 277 aaPredicted RBP15.19■□□□□ 0.02
CASC3-207ENST00000581849 APOBP04114 4563 aaKnown RBP15.19■□□□□ 0.02
CASC3-207ENST00000581849 DNAH5Q8TE73 4624 aa15.18■□□□□ 0.02
CASC3-207ENST00000581849 EREGO14944 169 aa15.18■□□□□ 0.02
CASC3-207ENST00000581849 RS1O15537 224 aa15.18■□□□□ 0.02
CASC3-207ENST00000581849 ERVFC1-1P60608 527 aa15.18■□□□□ 0.02
CASC3-207ENST00000581849 ZNF726P1Q15940 193 aa15.18■□□□□ 0.02
CASC3-207ENST00000581849 WFDC10BQ8IUB3 73 aa15.18■□□□□ 0.02
CASC3-207ENST00000581849 C10orf126Q8N4M7 172 aa15.18■□□□□ 0.02
CASC3-207ENST00000581849 TRBV6-4A0A1B0GX49 114 aa15.17■□□□□ 0.02
CASC3-207ENST00000581849 PPT1P50897 306 aa15.17■□□□□ 0.02
CASC3-207ENST00000581849 PGPEP1Q9NXJ5 209 aa15.17■□□□□ 0.02
CASC3-207ENST00000581849 G3V3Q6 166 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 RHOHQ15669 191 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 RGS21Q2M5E4 152 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 PIK3CD-AS1Q5SR53 167 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 AKR1C8PQ5T2L2 129 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 CFAP126Q5VTH2 177 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 CDPF1Q6NVV7 123 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 PRADC1Q9BSG0 188 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 MSRB1Q9NZV6 116 aa15.16■□□□□ 0.02
CASC3-207ENST00000581849 LOC100131303A0A0U1RQF7 123 aa15.15■□□□□ 0.02
CASC3-207ENST00000581849 RNASE3P12724 160 aaKnown RBP15.15■□□□□ 0.02
CASC3-207ENST00000581849 SLC25A29Q8N8R3 303 aa15.15■□□□□ 0.02
CASC3-207ENST00000581849 NHLRC2Q8NBF2 726 aa15.15■□□□□ 0.02
CASC3-207ENST00000581849 HIST1H2BAQ96A08 127 aa15.15■□□□□ 0.02
CASC3-207ENST00000581849 IFNA7P01567 189 aa15.14■□□□□ 0.01
CASC3-207ENST00000581849 MAPKAPK5-AS1Q8N8E1 139 aa15.14■□□□□ 0.01
CASC3-207ENST00000581849 ARL2-SNX15V9GYD0 113 aa15.14■□□□□ 0.01
CASC3-207ENST00000581849 FABP5P3A8MUU1 101 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms