RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TAX1BP3O14907 124 aa11.38□□□□□ -0.59
CSNK1D-217ENST00000581241 ELANEP08246 267 aa11.38□□□□□ -0.59
CSNK1D-217ENST00000581241 C11orf53Q8IXP5 236 aa11.38□□□□□ -0.59
CSNK1D-217ENST00000581241 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
CSNK1D-217ENST00000581241 NDUFC2O95298 119 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 NPBQ8NG41 125 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 H0YGX0 51 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 H3BQ85 93 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 I3L2K1 104 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 TEN1Q86WV5 123 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 TOMM6Q96B49 74 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 DEFB105AQ8NG35 78 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 WDR81Q562E7 1941 aa11.37□□□□□ -0.59
CSNK1D-217ENST00000581241 G3V4G9 280 aa11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 RNASE8Q8TDE3 154 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 J3KT08 172 aa11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 NDUFS5O43920 106 aa11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 SP5Q6BEB4 398 aaPredicted RBP11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 K7ENP7 123 aa11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 FOXI1Q12951 378 aa11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 Q96MF0 132 aa11.36□□□□□ -0.59
CSNK1D-217ENST00000581241 FXYD2P54710 66 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 ATP6V0E2Q8NHE4 81 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 RLFQ13129 1914 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 TCF20Q9UGU0 1960 aaKnown RBP11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 A4D1N5 150 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 K7EQD1 137 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 LINC01620Q4KN68 170 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 IGFBPL1Q8WX77 278 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 BAALCQ8WXS3 180 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
CSNK1D-217ENST00000581241 GTSF1Q8WW33 167 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 FAM236AA0A1B0GUQ0 79 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 FAM236BA0A1B0GV22 79 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 A0A1B0GX51 115 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 Q6ZSR3 168 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 FGF23Q9GZV9 251 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 LHBP01229 141 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 WFDC2Q14508 124 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 PSMB8P28062 276 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 SMIM20Q8N5G0 67 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 RNF152Q8N8N0 203 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 MAPK1IP1LQ8NDC0 245 aa11.34□□□□□ -0.59
CSNK1D-217ENST00000581241 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
CSNK1D-217ENST00000581241 IGKV3D-7A0A0C4DH55 119 aa11.33□□□□□ -0.6
CSNK1D-217ENST00000581241 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
CSNK1D-217ENST00000581241 Q6ZQT7 251 aa11.33□□□□□ -0.6
CSNK1D-217ENST00000581241 SND1-IT1Q9HBX3 110 aa11.33□□□□□ -0.6
CSNK1D-217ENST00000581241 CTSZQ9UBR2 303 aa11.33□□□□□ -0.6
CSNK1D-217ENST00000581241 C22orf46C9J442 243 aa11.33□□□□□ -0.6
CSNK1D-217ENST00000581241 SPRY2O43597 315 aa11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 WI2-2373I1.2A0A1W2PRP0 233 aa11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 DAZ2Q13117 558 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 DAZ4Q86SG3 579 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 DAZ3Q9NR90 486 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 HELZP42694 1942 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 C5orf47Q569G3 176 aa11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.64e-7■■■■□ 25
CSNK1D-217ENST00000581241 C11orf86A6NJI1 115 aa11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 C16orf74Q96GX8 76 aa11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 FAM215AQ9Y5M1 114 aa11.32□□□□□ -0.6
CSNK1D-217ENST00000581241 E9PLD3 99 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 C3orf56Q8N813 242 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 RITA1Q96K30 269 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 C16orf54Q6UWD8 224 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 MGAMO43451 1857 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 FANCMQ8IYD8 2048 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 K7EIM0 57 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 SPRNQ5BIV9 151 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
CSNK1D-217ENST00000581241 ABCA7Q8IZY2 2146 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 CGB3P0DN86 165 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 LGALS9O00182 355 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 FAM167A-AS1Q96KT0 104 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 A0A0J9YY99 117 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 C1orf43Q9BWL3 253 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 IGHV4-4A0A075B6R2 117 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 IGKV2D-24A0A075B6R9 120 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 A0A0J9YXV3 536 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
CSNK1D-217ENST00000581241 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 CACNA1IQ9P0X4 2223 aa11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 KIAA1671Q9BY89 1806 aa11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 TMEM61Q8N0U2 210 aa11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
CSNK1D-217ENST00000581241 CTRLP40313 264 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 UBE2BP63146 152 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 C9orf47Q6ZRZ4 202 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 BUB3O43684 328 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms