RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 CSMD1Q96PZ7 3565 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 TRBV7-1A0A0A6YYK4 115 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 IGHV1-24A0A0C4DH33 117 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 NPIPB5A8MRT5 1133 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 PATE3B3GLJ2 98 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 C9JAW5 83 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 CGAP01215 116 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 TRBV6-6A0A0A6YYG2 114 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 FAM240AA0A1B0GVK7 77 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 TINCRA0A1B0GVN0 87 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 FXYD7P58549 80 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 ETDBQ3ZM63 59 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 TREML4Q6UXN2 200 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 MIR17HGQ75NE6 70 aa3.44□□□□□ -1.86
RTTN-206ENST00000581161 RNASE7Q9H1E1 156 aaKnown RBP3.44□□□□□ -1.86
RTTN-206ENST00000581161 MYO7BQ6PIF6 2116 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 LINC00473A8K010 186 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 C9orf66Q5T8R8 295 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 ASPHD1Q5U4P2 390 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 Q6ZVH6 145 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 IGF2BP2-AS1Q96M15 143 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 WDR83OSQ9Y284 106 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 NCOA6Q14686 2063 aaPredicted RBP3.43□□□□□ -1.86
RTTN-206ENST00000581161 TRAV40A0A0B4J280 105 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 J3QKU1 62 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 FRMD6-AS1P0C7T7 363 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 PDE6HQ13956 83 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 ZNF329Q86UD4 541 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 LEAP2Q969E1 77 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 RNF5Q99942 180 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 PILRBQ9UKJ0 227 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 TCF19Q9Y242 345 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.43□□□□□ -1.86
RTTN-206ENST00000581161 HERVK_113P63121 156 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 HIGD2BQ4VC39 106 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 ZC2HC1BQ5TFG8 222 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 AJUBAQ96IF1 538 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 C20orf144Q9BQM9 153 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 BUB1B-PAK6H3BSN5 160 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 TCF15Q12870 199 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 ZNF474Q6S9Z5 364 aaPredicted RBP3.43□□□□□ -1.86
RTTN-206ENST00000581161 WDR86Q86TI4 376 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 CSTL1Q9H114 145 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 IGKV1-16P04430 117 aa3.43□□□□□ -1.86
RTTN-206ENST00000581161 TACC2O95359 2948 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 LY6G6EA0A0G2JKS1 128 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 I3L3M4 83 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 K7EN84 100 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 TRBV12-3P01733 135 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 GATA3P23771 443 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 COL8A2P25067 703 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 LY6DQ14210 128 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 FAM222AQ5U5X8 452 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 PPDPFLQ8WWR9 84 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 U3KQA8 63 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 PIEZO2Q9H5I5 2752 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 EML6Q6ZMW3 1958 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 PRDM6Q9NQX0 595 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 SDK2Q58EX2 2172 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 IGHV4OR15-8A0A075B7B6 117 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 A0A087WW49 117 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 YPEL3P61236 119 aaPredicted RBP3.42□□□□□ -1.86
RTTN-206ENST00000581161 CFHR3Q02985 330 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 RHOHQ15669 191 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 C16orf54Q6UWD8 224 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 MSRB2Q9Y3D2 182 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 MRPS18CQ9Y3D5 142 aaKnown RBP3.42□□□□□ -1.86
RTTN-206ENST00000581161 RALGAPA1Q6GYQ0 2036 aa3.42□□□□□ -1.86
RTTN-206ENST00000581161 PMS2P5A8MQ11 134 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 OOSP1A8MZH6 123 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 NTN3O00634 580 aaPredicted RBP3.41□□□□□ -1.86
RTTN-206ENST00000581161 C3orf79P0CE67 100 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 ZNF883P0CG24 379 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 MRPL23Q16540 153 aaKnown RBP3.41□□□□□ -1.86
RTTN-206ENST00000581161 J3KT08 172 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 IGHV3-48P01763 117 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 C15orf32Q32M92 178 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 Q8N9L7 120 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 PSG8Q9UQ74 426 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 TEX49A0A1B0GTD5 131 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 COX7A2LO14548 114 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 NDUFA1O15239 70 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 CXCL5P42830 114 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 EFNA4P52798 201 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 CRYBA4P53673 196 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 KLF14Q8TD94 323 aaPredicted RBP3.41□□□□□ -1.86
RTTN-206ENST00000581161 TP53TG3Q9ULZ0 132 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 SHANK1Q9Y566 2161 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 TRBV10-2A0A0K0K1G8 114 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 MINOS1Q5TGZ0 78 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 BOD1L2Q8IYS8 172 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 RPRMLQ8N4K4 120 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 MINOS1-NBL1R4GNA1 71 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 H3BMG7 143 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 C5orf64Q2M2E5 130 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 Q8N9W7 124 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 GAFA1Q96PS6 74 aa3.41□□□□□ -1.86
RTTN-206ENST00000581161 V9GYV3 84 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms