RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 HOXA5P20719 270 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 PPT1P50897 306 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 RAB5CP51148 216 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 ZNF80P51504 273 aaPredicted RBP10.13□□□□□ -0.79
MKS1-207ENST00000578789 ZFP69Q49AA0 526 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 EIF5AL1Q6IS14 154 aaKnown RBP10.13□□□□□ -0.79
MKS1-207ENST00000578789 SLC51BQ86UW2 128 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 POM121L12Q8N7R1 296 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 MDFICQ9P1T7 246 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 NAGKQ9UJ70 344 aa10.13□□□□□ -0.79
MKS1-207ENST00000578789 TRGV2A0A075B6R0 118 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 TRAV34A0A0B4J273 112 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 TRBV6-1A0A0K0K1D8 114 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 GCGP01275 180 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 TYMSP04818 313 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 H2AFB1P0C5Y9 115 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 C9orf62Q8N4C0 152 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 KCNS1Q96KK3 526 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 SPXQ9BT56 116 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 SDF2L1Q9HCN8 221 aa10.12□□□□□ -0.79
MKS1-207ENST00000578789 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
MKS1-207ENST00000578789 MUC4Q99102 2169 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 IGHV3-16A0A0C4DH30 117 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 PAGE4O60829 102 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 SULT1A2P50226 295 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 RNF212Q495C1 297 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 CST9LP1Q5W188 147 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 FMC1Q96HJ9 113 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 C11orf21Q9P2W6 132 aa10.11□□□□□ -0.79
MKS1-207ENST00000578789 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 TRAV1-1A0A0B4J248 108 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 A0A1B0GV50 99 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 H3BNG1 76 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 GNRH2O43555 120 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 OR5I1Q13606 314 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 COX8CQ7Z4L0 72 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 RASL10AQ92737 203 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
MKS1-207ENST00000578789 A0A1B0GVG6 124 aa10.09□□□□□ -0.79
MKS1-207ENST00000578789 NUDT3O95989 172 aa10.09□□□□□ -0.79
MKS1-207ENST00000578789 AKR1C3P42330 323 aa10.09□□□□□ -0.79
MKS1-207ENST00000578789 UBE2DNLQ8IWF7 75 aa10.09□□□□□ -0.79
MKS1-207ENST00000578789 ZFP30Q9Y2G7 519 aa10.09□□□□□ -0.79
MKS1-207ENST00000578789 M0R2P5 195 aa10.08□□□□□ -0.8
MKS1-207ENST00000578789 LTAP01374 205 aa10.08□□□□□ -0.8
MKS1-207ENST00000578789 FAM3BP58499 235 aaPredicted RBP10.08□□□□□ -0.8
MKS1-207ENST00000578789 UBE2G1P62253 170 aa10.08□□□□□ -0.8
MKS1-207ENST00000578789 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
MKS1-207ENST00000578789 A0A0J9YY99 117 aa10.07□□□□□ -0.8
MKS1-207ENST00000578789 CCL20P78556 96 aa10.07□□□□□ -0.8
MKS1-207ENST00000578789 ZC2HC1AQ96GY0 325 aa10.07□□□□□ -0.8
MKS1-207ENST00000578789 VSIG2Q96IQ7 327 aa10.07□□□□□ -0.8
MKS1-207ENST00000578789 C9orf85Q96MD7 179 aa10.07□□□□□ -0.8
MKS1-207ENST00000578789 DNAH10Q8IVF4 4471 aa10.07□□□□□ -0.8
MKS1-207ENST00000578789 IGKV3D-20A0A0C4DH25 116 aa10.06□□□□□ -0.8
MKS1-207ENST00000578789 SCO2A0A1W2PP80 73 aa10.06□□□□□ -0.8
MKS1-207ENST00000578789 FABP5P3A8MUU1 101 aa10.06□□□□□ -0.8
MKS1-207ENST00000578789 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
MKS1-207ENST00000578789 IGHV3-53P01767 116 aa10.06□□□□□ -0.8
MKS1-207ENST00000578789 S100A9P06702 114 aaKnown RBP10.06□□□□□ -0.8
MKS1-207ENST00000578789 EPPK1P58107 5090 aaKnown RBP10.06□□□□□ -0.8
MKS1-207ENST00000578789 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 CRIP1P50238 77 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 SLAQ13239 276 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 FHL2Q14192 279 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 PTH2Q96A98 100 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 TXNDC17Q9BRA2 123 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 GNG13Q9P2W3 67 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 PRO0255Q9UI72 69 aa10.05□□□□□ -0.8
MKS1-207ENST00000578789 SH2D1AO60880 128 aa10.04□□□□□ -0.8
MKS1-207ENST00000578789 RNASE3P12724 160 aaKnown RBP10.04□□□□□ -0.8
MKS1-207ENST00000578789 CCL18P55774 89 aa10.04□□□□□ -0.8
MKS1-207ENST00000578789 ZNF674Q2M3X9 581 aa10.04□□□□□ -0.8
MKS1-207ENST00000578789 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
MKS1-207ENST00000578789 A0A096LPF7 62 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 PAX4O43316 350 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 SFTA3P0C7M3 94 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 CRYBA4P53673 196 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 DNLZQ5SXM8 178 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 ZNRF2Q8NHG8 242 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 LINC00588Q9Y4M8 146 aa10.03□□□□□ -0.8
MKS1-207ENST00000578789 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 B4DEV8 164 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 ASIPP42127 132 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 LINC01559Q495D7 138 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 Q6ZR54 194 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
MKS1-207ENST00000578789 KRBOX1C9JBD0 128 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 IFNA1P01562 189 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 ORM1P02763 201 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 NKX2-5P52952 324 aaPredicted RBP10.01□□□□□ -0.81
MKS1-207ENST00000578789 MEF2BQ02080 365 aaPredicted RBP10.01□□□□□ -0.81
MKS1-207ENST00000578789 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 ZNF506Q5JVG8 444 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms