RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 LINC00694P0DN24 101 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 IFITM1P13164 125 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 EVI2AP22794 236 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 CRYGSP22914 178 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 GLRXP35754 106 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 MPV17P39210 176 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 CXCL12P48061 93 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 ATP5IP56385 69 aaPredicted RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 FXYD7P58549 80 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 UBE2D3P61077 147 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 UBE2D2P62837 147 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 RPL30P62888 115 aaKnown RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 GNG5P63218 68 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 UBE2L3P68036 154 aaKnown RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 EIF4EBP1Q13541 118 aaPredicted RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 EBI3Q14213 229 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 ZNF77Q15935 545 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 C12orf74Q32Q52 190 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 TTC32Q5I0X7 151 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 MEIG1Q5JSS6 88 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 C10orf128Q5T292 105 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 Q6Q795 121 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 LINC00322Q6ZN03 302 aaPredicted RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 Q6ZS92 163 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 SBSPONQ8IVN8 264 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 LRRC75A-AS1Q8N1F1 130 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 DRAM1Q8N682 238 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 GATD1Q8NB37 220 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 TMEM158Q8WZ71 300 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 CDX2Q99626 313 aaPredicted RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 SLC25A2Q9BXI2 301 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 MRPL32Q9BYC8 188 aaKnown RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 TMEM126AQ9H061 195 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 DEFB127Q9H1M4 99 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 MAP1LC3AQ9H492 121 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 RPP21Q9H633 154 aaKnown RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 TMEM167BQ9NRX6 74 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 ZNF355PQ9NSJ1 428 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 C21orf62Q9NYP8 219 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 ZNF492Q9P255 531 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 KLF12Q9Y4X4 402 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 SOX21Q9Y651 276 aaPredicted RBP1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 EML6Q6ZMW3 1958 aa1.37□□□□□ -2.19
PTP4A1-204ENST00000578299 RAI1Q7Z5J4 1906 aaPredicted RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 PTPRBP23467 1997 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 LAMA3Q16787 3333 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 IGKV2D-24A0A075B6R9 120 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 TRAV8-1A0A0A6YYK1 113 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 TRAV8-2A0A0B4J237 113 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 TRAV8-4A0A0B4J246 113 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 TMEM213A2RRL7 107 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 RBAKDNA6NC62 111 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 RBMY1BA6NDE4 496 aaKnown RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 RBMY1EA6NEQ0 496 aaKnown RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 C17orf98A8MV24 154 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 A8MWV9 139 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 OOSP1A8MZH6 123 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 C9JAW5 83 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 C12orf77C9JDV5 145 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 D6R8Y8 96 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 LINC01619G3V211 115 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 MPDU1O75352 247 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 SNCGO76070 127 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 TCL1BO95988 128 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 P01737 135 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 RBMY1DP0C7P1 496 aaKnown RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 RBMY1A1P0DJD3 496 aaKnown RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 IFI27P40305 119 aaPredicted RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 CSN1S1P47710 185 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 PSMB2P49721 201 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 EFNA4P52798 201 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 FGF12P61328 243 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 HERVK_113P63121 156 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 KIAA0087Q14695 138 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 TBC1D28Q2M2D7 210 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 RSPO1Q2MKA7 263 aaPredicted RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 TET2Q6N021 2002 aaPredicted RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 SFTA2Q6UW10 78 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 HRCT1Q6UXD1 115 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 ZNF493Q6ZR52 646 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 FAM19A5Q7Z5A7 132 aaPredicted RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 Q86TA4 180 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 RPRMLQ8N4K4 120 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 C15orf53Q8NAA6 179 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 OR11H6Q8NGC7 330 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 OR10J6PQ8NGY7 276 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 OR13C6PQ8NH95 151 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 CCL4L1Q8NHW4 92 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 PIFOQ8TCI5 191 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 PATE1Q8WXA2 126 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 BAALCQ8WXS3 180 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 SPTSSAQ969W0 71 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 IFI27L1Q96BM0 104 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 FLYWCH2Q96CP2 140 aaKnown RBP1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 FAM167A-AS1Q96KT0 104 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 BMFQ96LC9 184 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 ZNF488Q96MN9 340 aa1.36□□□□□ -2.19
PTP4A1-204ENST00000578299 ODF3Q96PU9 254 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms