RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
LITAF-209ENST00000571688 CITED1Q99966 193 aa12.87□□□□□ -0.35
LITAF-209ENST00000571688 MSRB2Q9Y3D2 182 aa12.87□□□□□ -0.35
LITAF-209ENST00000571688 TMEM262E9PQX1 116 aa12.86□□□□□ -0.35
LITAF-209ENST00000571688 C2orf66Q6UXQ4 117 aa12.86□□□□□ -0.35
LITAF-209ENST00000571688 KIR2DL4Q99706 377 aa12.86□□□□□ -0.35
LITAF-209ENST00000571688 BUB3O43684 328 aa12.85□□□□□ -0.35
LITAF-209ENST00000571688 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
LITAF-209ENST00000571688 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
LITAF-209ENST00000571688 DPM3Q9P2X0 92 aa12.85□□□□□ -0.35
LITAF-209ENST00000571688 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
LITAF-209ENST00000571688 A0A0J9YY99 117 aa12.85□□□□□ -0.35
LITAF-209ENST00000571688 Q6ZQT7 251 aa12.85□□□□□ -0.35
LITAF-209ENST00000571688 NCOR1O75376 2440 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 IGHV3-35A0A0C4DH35 117 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 H3BVH4 76 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 RNF223E7ERA6 249 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 CFC1BP0CG36 223 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 CFC1P0CG37 223 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 FAM57AQ8TBR7 257 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
LITAF-209ENST00000571688 NHLRC4P0CG21 123 aaPredicted RBP12.83□□□□□ -0.36
LITAF-209ENST00000571688 SRD5A1P18405 259 aa12.83□□□□□ -0.36
LITAF-209ENST00000571688 HES1Q14469 280 aa12.83□□□□□ -0.36
LITAF-209ENST00000571688 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
LITAF-209ENST00000571688 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.36
LITAF-209ENST00000571688 E7EQL1 145 aa12.83□□□□□ -0.36
LITAF-209ENST00000571688 TRAV8-2A0A0B4J237 113 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
LITAF-209ENST00000571688 MRPL53Q96EL3 112 aaKnown RBP12.82□□□□□ -0.36
LITAF-209ENST00000571688 A0A0G2JNJ9 132 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 LYNX1G3V0Z9 82 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 M0QXV9 152 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 CRYGDP07320 174 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 LYNX1P0DP58 116 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 C9orf47Q6ZRZ4 202 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 Q9UFV3 132 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 CSMD1Q96PZ7 3565 aa12.82□□□□□ -0.36
LITAF-209ENST00000571688 FAM90A27PA6NNH2 459 aa12.81□□□□□ -0.36
LITAF-209ENST00000571688 HIF1ANQ9NWT6 349 aa12.81□□□□□ -0.36
LITAF-209ENST00000571688 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
LITAF-209ENST00000571688 IGLV4-69A0A075B6H9 119 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 C11orf86A6NJI1 115 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 RHODO00212 210 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 Q6ZS46 218 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 LY6G5BQ8NDX9 201 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 B5MCH6 92 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 TGFAP01135 160 aa12.8□□□□□ -0.36
LITAF-209ENST00000571688 RP1L1Q8IWN7 2480 aaPredicted RBP12.8□□□□□ -0.36
LITAF-209ENST00000571688 IGHV3-66A0A0C4DH42 116 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 M0R381 172 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 HERVK_113P61574 105 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 PRR9Q5T870 116 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 DPH3P1Q9H4G8 78 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 TACC2O95359 2948 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 CLPSL1A2RUU4 121 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 SLC25A20O43772 301 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 ASIPP42127 132 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 SLC25A29Q8N8R3 303 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 PRO1854Q9UHT4 67 aa12.79□□□□□ -0.36
LITAF-209ENST00000571688 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
LITAF-209ENST00000571688 PAPPA-AS1Q5QFB9 102 aa12.78□□□□□ -0.36
LITAF-209ENST00000571688 TRIOBPQ9H2D6 2365 aa12.78□□□□□ -0.36
LITAF-209ENST00000571688 ODF3BA8MYP8 253 aa12.77□□□□□ -0.36
LITAF-209ENST00000571688 DUSP14O95147 198 aaKnown RBP12.77□□□□□ -0.36
LITAF-209ENST00000571688 TSHBP01222 138 aa12.77□□□□□ -0.36
LITAF-209ENST00000571688 TSPEAR-AS2P59090 65 aa12.77□□□□□ -0.36
LITAF-209ENST00000571688 Q8N6K4 173 aa12.77□□□□□ -0.37
LITAF-209ENST00000571688 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
LITAF-209ENST00000571688 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
LITAF-209ENST00000571688 NDUFV3P56181 108 aaKnown RBP12.76□□□□□ -0.37
LITAF-209ENST00000571688 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
LITAF-209ENST00000571688 ADGRG4Q8IZF6 3080 aa12.76□□□□□ -0.37
LITAF-209ENST00000571688 IGHV3OR16-13A0A075B7E8 117 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 IGHV7-81A0A0B4J1V7 117 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 IGHV3-74A0A0B4J1X5 117 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 PRTN3P24158 256 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
LITAF-209ENST00000571688 GAGE2BQ13066 116 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 GAGE2EQ4V326 116 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 GAGE2DQ9UEU5 116 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 B9A039 149 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 C9JAW5 83 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 SPRY2O43597 315 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 CLEC3BP05452 202 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 GPHB5Q86YW7 130 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 TIMD4Q96H15 378 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 AMELXQ99217 191 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 EMP1P54849 157 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 LENEPQ9Y5L5 61 aa12.75□□□□□ -0.37
LITAF-209ENST00000571688 ARHGAP32A7KAX9 2087 aa12.74□□□□□ -0.37
LITAF-209ENST00000571688 TRAV4A0A0B4J268 109 aa12.74□□□□□ -0.37
LITAF-209ENST00000571688 IGIPA6NJ69 53 aa12.74□□□□□ -0.37
LITAF-209ENST00000571688 SNCGO76070 127 aa12.74□□□□□ -0.37
LITAF-209ENST00000571688 MGPP08493 103 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms