RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 C17orf98A8MV24 154 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 H7BZZ5 65 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 SUB1P53999 127 aaKnown RBP eCLIP4.92□□□□□ -1.621e-27■■■■■ 29.6
KARS-211ENST00000569298 FHL2Q14192 279 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 LAGE3Q14657 143 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 DEFB134Q4QY38 66 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 C2orf83Q53S99 150 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 S100A7L2Q5SY68 101 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 SEM1Q6ZVN7 128 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 LYPD1Q8N2G4 141 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 TMEM75Q8N9X5 138 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 SMCR5Q8TEV8 140 aa4.92□□□□□ -1.62
KARS-211ENST00000569298 ZNF71Q9NQZ8 489 aaPredicted RBP4.92□□□□□ -1.62
KARS-211ENST00000569298 LSM7Q9UK45 103 aaKnown RBP4.92□□□□□ -1.62
KARS-211ENST00000569298 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 RBMY1BA6NDE4 496 aaKnown RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 RBMY1EA6NEQ0 496 aaKnown RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 SDHAF1A6NFY7 115 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 IQCF6A8MYZ5 107 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 CCKP06307 115 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 RBMY1DP0C7P1 496 aaKnown RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 RBMY1A1P0DJD3 496 aaKnown RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 RBMY1CP0DJD4 496 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 HOXD3P31249 432 aaPredicted RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 XCL1P47992 114 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 SLURP1P55000 103 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 RBMY1FQ15415 496 aaKnown RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 ORMDL2Q53FV1 153 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 Q86TA4 180 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 ZCCHC24Q8N2G6 241 aaKnown RBP4.91□□□□□ -1.62
KARS-211ENST00000569298 FAM216BQ8N7L0 139 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 PRR25Q96S07 402 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 TM2D3Q9BRN9 247 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 XCL2Q9UBD3 114 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 NUMA1Q14980 2115 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 BPTFQ12830 3046 aa4.91□□□□□ -1.62
KARS-211ENST00000569298 KIAA1549LQ6ZVL6 1849 aa4.9□□□□□ -1.62
KARS-211ENST00000569298 FSTL3O95633 263 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 IGF1P05019 195 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 LGALS3P17931 250 aaKnown RBP4.9□□□□□ -1.63
KARS-211ENST00000569298 BRWD1-AS2P59051 145 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 TCF15Q12870 199 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 RHOHQ15669 191 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.9□□□□□ -1.63
KARS-211ENST00000569298 FAM27BQ5VT28 67 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 C10orf113Q5VZT2 155 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 Q8IYB0 196 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 CD177Q8N6Q3 437 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 NUP37Q8NFH4 326 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 FGFBP3Q8TAT2 258 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 WFDC5Q8TCV5 224 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 TMEM14CQ9P0S9 112 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 UBE2D4Q9Y2X8 147 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 EML5Q05BV3 1969 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 PCNX3Q9H6A9 2034 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 SCN3AQ9NY46 2000 aa4.9□□□□□ -1.63
KARS-211ENST00000569298 DOCK11Q5JSL3 2073 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 ATG2BQ96BY7 2078 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 TRAV7A0A075B6U4 112 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 TRAV13-2A0A0B4J235 113 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 IGHV1-69DA0A0B4J2H0 117 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 C11orf86A6NJI1 115 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 TRIAP1O43715 76 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 NDUFS5O43920 106 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 NXPH4O95158 308 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 NDUFA3O95167 84 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 IGHV3-13P01766 116 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 SAA4P35542 130 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 ZNF134P52741 427 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 GTF3C1Q12789 2109 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 C11orf44Q8N8P7 122 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 TOMM6Q96B49 74 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 ZNF524Q96C55 264 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 MRPL53Q96EL3 112 aaKnown RBP4.89□□□□□ -1.63
KARS-211ENST00000569298 C17orf77Q96MU5 243 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 DEFB127Q9H1M4 99 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 TMEM14BQ9NUH8 114 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 ICOSQ9Y6W8 199 aa4.89□□□□□ -1.63
KARS-211ENST00000569298 NCOA6Q14686 2063 aaPredicted RBP4.88□□□□□ -1.63
KARS-211ENST00000569298 TRIOO75962 3097 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 ARHGAP21Q5T5U3 1957 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 TIMM17BO60830 172 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 IGLV2-11P01706 119 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 CLPSP04118 112 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 GRPP07492 148 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 RNASE2P10153 161 aaKnown RBP4.88□□□□□ -1.63
KARS-211ENST00000569298 CD70P32970 193 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 PLGLAQ15195 96 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 GFRALQ6UXV0 394 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 ZNF826PQ6ZT77 177 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 THAP8Q8NA92 274 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 RNF185Q96GF1 192 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 FSCN3Q9NQT6 498 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 HEATR5BQ9P2D3 2071 aa4.88□□□□□ -1.63
KARS-211ENST00000569298 PTPRSQ13332 1948 aa4.87□□□□□ -1.63
KARS-211ENST00000569298 ARID1AO14497 2285 aa4.87□□□□□ -1.63
KARS-211ENST00000569298 IGLV3-32A0A0A0MS00 114 aa4.87□□□□□ -1.63
KARS-211ENST00000569298 IGHV4-39P01824 125 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms