RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
SPSB3-210ENST00000568416 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
SPSB3-210ENST00000568416 Q8N1X5 172 aa12.86□□□□□ -0.35
SPSB3-210ENST00000568416 OR4C5Q8NGB2 326 aa12.86□□□□□ -0.35
SPSB3-210ENST00000568416 PCNPQ8WW12 178 aaKnown RBP12.86□□□□□ -0.35
SPSB3-210ENST00000568416 WFDC10BQ8IUB3 73 aa12.85□□□□□ -0.35
SPSB3-210ENST00000568416 HSD17B11Q8NBQ5 300 aa12.85□□□□□ -0.35
SPSB3-210ENST00000568416 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
SPSB3-210ENST00000568416 KCNS1Q96KK3 526 aa12.85□□□□□ -0.35
SPSB3-210ENST00000568416 PSMG3Q9BT73 122 aaPredicted RBP12.85□□□□□ -0.35
SPSB3-210ENST00000568416 SDF2L1Q9HCN8 221 aa12.85□□□□□ -0.35
SPSB3-210ENST00000568416 LY96Q9Y6Y9 160 aa12.85□□□□□ -0.35
SPSB3-210ENST00000568416 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
SPSB3-210ENST00000568416 C9JCJ5 164 aa12.84□□□□□ -0.35
SPSB3-210ENST00000568416 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
SPSB3-210ENST00000568416 RAB24Q969Q5 203 aa12.84□□□□□ -0.35
SPSB3-210ENST00000568416 SGK494Q96LW2 274 aa12.84□□□□□ -0.35
SPSB3-210ENST00000568416 AQP10Q96PS8 301 aa12.84□□□□□ -0.35
SPSB3-210ENST00000568416 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
SPSB3-210ENST00000568416 K7EP13 123 aa12.83□□□□□ -0.36
SPSB3-210ENST00000568416 TCRAP04437 139 aa12.83□□□□□ -0.36
SPSB3-210ENST00000568416 ATP6V0CP27449 155 aa12.83□□□□□ -0.36
SPSB3-210ENST00000568416 ERVFC1-1P60608 527 aa12.83□□□□□ -0.36
SPSB3-210ENST00000568416 C5orf17Q8NAS9 161 aa12.83□□□□□ -0.36
SPSB3-210ENST00000568416 TXNDC17Q9BRA2 123 aa12.83□□□□□ -0.36
SPSB3-210ENST00000568416 LOC100131303A0A0U1RQF7 123 aa12.82□□□□□ -0.36
SPSB3-210ENST00000568416 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
SPSB3-210ENST00000568416 GCHFRP30047 84 aa12.82□□□□□ -0.36
SPSB3-210ENST00000568416 ZNF80P51504 273 aaPredicted RBP12.82□□□□□ -0.36
SPSB3-210ENST00000568416 ASB13Q8WXK3 278 aa12.82□□□□□ -0.36
SPSB3-210ENST00000568416 NDFIP1Q9BT67 221 aa12.82□□□□□ -0.36
SPSB3-210ENST00000568416 BATF3Q9NR55 127 aa12.82□□□□□ -0.36
SPSB3-210ENST00000568416 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
SPSB3-210ENST00000568416 PTTG1O95997 202 aa12.81□□□□□ -0.36
SPSB3-210ENST00000568416 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
SPSB3-210ENST00000568416 SERF2P84101 59 aa12.81□□□□□ -0.36
SPSB3-210ENST00000568416 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
SPSB3-210ENST00000568416 EREGO14944 169 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 IGLV2-11P01706 119 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 MBP02144 154 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 EVI2AP22794 236 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 Q5BKY6 102 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 MED28Q9H204 178 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 SCRT2Q9NQ03 307 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
SPSB3-210ENST00000568416 GGTLC3B5MD39 225 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 K7EQM0 130 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 FUSP35637 526 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPSB3-210ENST00000568416 TIRAPP58753 221 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 CDPF1Q6NVV7 123 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 SH3BGRL3Q9H299 93 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 EPDR1Q9UM22 224 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 TNFSF18Q9UNG2 199 aa12.79□□□□□ -0.36
SPSB3-210ENST00000568416 A0A087WTM6 91 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 FBLL1A6NHQ2 334 aaKnown RBP12.78□□□□□ -0.36
SPSB3-210ENST00000568416 TAAR5O14804 337 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 RS1O15537 224 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 CXorf1O96002 111 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 GCGP01275 180 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 SUMO1P63165 101 aaKnown RBP12.78□□□□□ -0.36
SPSB3-210ENST00000568416 ZNF876PQ49A33 203 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 DPPA3Q6W0C5 159 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 C9orf85Q96MD7 179 aa12.78□□□□□ -0.36
SPSB3-210ENST00000568416 ACTR3CQ9C0K3 210 aaPredicted RBP12.78□□□□□ -0.36
SPSB3-210ENST00000568416 CIDEAO60543 219 aa12.77□□□□□ -0.37
SPSB3-210ENST00000568416 PFN1P07737 140 aaKnown RBP12.77□□□□□ -0.37
SPSB3-210ENST00000568416 GIPP09681 153 aaPredicted RBP12.77□□□□□ -0.37
SPSB3-210ENST00000568416 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.37
SPSB3-210ENST00000568416 CFAP126Q5VTH2 177 aa12.77□□□□□ -0.37
SPSB3-210ENST00000568416 TMEM75Q8N9X5 138 aa12.77□□□□□ -0.37
SPSB3-210ENST00000568416 CRYGDP07320 174 aa12.76□□□□□ -0.37
SPSB3-210ENST00000568416 SMUG1Q53HV7 270 aa12.76□□□□□ -0.37
SPSB3-210ENST00000568416 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
SPSB3-210ENST00000568416 CYB561D1Q8N8Q1 229 aa12.76□□□□□ -0.37
SPSB3-210ENST00000568416 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
SPSB3-210ENST00000568416 NHLRC2Q8NBF2 726 aa12.76□□□□□ -0.37
SPSB3-210ENST00000568416 PTH2Q96A98 100 aa12.76□□□□□ -0.37
SPSB3-210ENST00000568416 TRBV6-4A0A1B0GX49 114 aa12.75□□□□□ -0.37
SPSB3-210ENST00000568416 RNF222A6NCQ9 220 aa12.75□□□□□ -0.37
SPSB3-210ENST00000568416 PGPEP1LA6NFU8 196 aa12.75□□□□□ -0.37
SPSB3-210ENST00000568416 ZFP69Q49AA0 526 aa12.75□□□□□ -0.37
SPSB3-210ENST00000568416 RPL7L1Q6DKI1 246 aaKnown RBP12.75□□□□□ -0.37
SPSB3-210ENST00000568416 PRNTQ86SH4 94 aa12.75□□□□□ -0.37
SPSB3-210ENST00000568416 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
SPSB3-210ENST00000568416 A0A1W2PRE2 83 aa12.74□□□□□ -0.37
SPSB3-210ENST00000568416 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
SPSB3-210ENST00000568416 PPT1P50897 306 aa12.74□□□□□ -0.37
SPSB3-210ENST00000568416 RHOHQ15669 191 aa12.74□□□□□ -0.37
SPSB3-210ENST00000568416 ZNF726P1Q15940 193 aa12.74□□□□□ -0.37
SPSB3-210ENST00000568416 SAPCD1Q5SSQ6 148 aa12.74□□□□□ -0.37
SPSB3-210ENST00000568416 PRADC1Q9BSG0 188 aa12.74□□□□□ -0.37
SPSB3-210ENST00000568416 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
SPSB3-210ENST00000568416 ZNF506Q5JVG8 444 aa12.73□□□□□ -0.37
SPSB3-210ENST00000568416 INO80EQ8NBZ0 244 aaPredicted RBP12.73□□□□□ -0.37
SPSB3-210ENST00000568416 BORCS7-ASMTA0A0B4J1R7 106 aa12.72□□□□□ -0.37
SPSB3-210ENST00000568416 IGHV3-73A0A0B4J1V6 119 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms