RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 PCNPQ8WW12 178 aaKnown RBP11.34□□□□□ -0.59
CCNF-203ENST00000564236 KCNS1Q96KK3 526 aa11.34□□□□□ -0.59
CCNF-203ENST00000564236 SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
CCNF-203ENST00000564236 EREGO14944 169 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 GNRH2O43555 120 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 EIF3GO75821 320 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCNF-203ENST00000564236 TYMSP04818 313 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 WFDC10BQ8IUB3 73 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
CCNF-203ENST00000564236 A0A087WTM6 91 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 CIDEAO60543 219 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
CCNF-203ENST00000564236 EVI2AP22794 236 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 OR10G9Q8NGN4 311 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 OR10G7Q8NGN6 311 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
CCNF-203ENST00000564236 SDF2L1Q9HCN8 221 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 MSRB1Q9NZV6 116 aa11.32□□□□□ -0.6
CCNF-203ENST00000564236 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
CCNF-203ENST00000564236 C5orf17Q8NAS9 161 aa11.31□□□□□ -0.6
CCNF-203ENST00000564236 PTH2Q96A98 100 aa11.31□□□□□ -0.6
CCNF-203ENST00000564236 AQP10Q96PS8 301 aa11.31□□□□□ -0.6
CCNF-203ENST00000564236 NAGKQ9UJ70 344 aa11.31□□□□□ -0.6
CCNF-203ENST00000564236 F6UZH7 168 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 TCRAP04437 139 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
CCNF-203ENST00000564236 GNG5P63218 68 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 SERF2P84101 59 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 ASB13Q8WXK3 278 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
CCNF-203ENST00000564236 RAB24Q969Q5 203 aa11.29□□□□□ -0.6
CCNF-203ENST00000564236 NDFIP1Q9BT67 221 aa11.29□□□□□ -0.6
CCNF-203ENST00000564236 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
CCNF-203ENST00000564236 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
CCNF-203ENST00000564236 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 MBP02144 154 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 XGP55808 180 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 C9orf85Q96MD7 179 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 C11orf21Q9P2W6 132 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 FAT1Q14517 4588 aa11.28□□□□□ -0.6
CCNF-203ENST00000564236 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 TAAR5O14804 337 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 RS1O15537 224 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 CRYGDP07320 174 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 PFN1P07737 140 aaKnown RBP11.27□□□□□ -0.61
CCNF-203ENST00000564236 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 GCHFRP30047 84 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 ZNF80P51504 273 aaPredicted RBP11.27□□□□□ -0.61
CCNF-203ENST00000564236 ZNF876PQ49A33 203 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.61
CCNF-203ENST00000564236 IGHV3-38A0A0C4DH36 116 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 GGTLC3B5MD39 225 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 K7EQM0 130 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 SLC25A29Q8N8R3 303 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 TMEM75Q8N9X5 138 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 HSD17B11Q8NBQ5 300 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 TNFSF18Q9UNG2 199 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 PSG8Q9UQ74 426 aa11.26□□□□□ -0.61
CCNF-203ENST00000564236 PTTG1O95997 202 aa11.25□□□□□ -0.61
CCNF-203ENST00000564236 RHOHQ15669 191 aa11.25□□□□□ -0.61
CCNF-203ENST00000564236 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
CCNF-203ENST00000564236 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
CCNF-203ENST00000564236 A0A1W2PRE2 83 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 LRCOL1A6NCL2 159 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 IBA57-AS1B1ANH7 110 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 EPM2AB3EWF7 344 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 CXorf1O96002 111 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 GCGP01275 180 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
CCNF-203ENST00000564236 KRTAP10-1P60331 282 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
CCNF-203ENST00000564236 FLI1Q01543 452 aaPredicted RBP11.24□□□□□ -0.61
CCNF-203ENST00000564236 SMUG1Q53HV7 270 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 CYB561D1Q8N8Q1 229 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 PRADC1Q9BSG0 188 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 BATF3Q9NR55 127 aa11.24□□□□□ -0.61
CCNF-203ENST00000564236 MGST1P10620 155 aaKnown RBP11.23□□□□□ -0.61
CCNF-203ENST00000564236 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCNF-203ENST00000564236 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
CCNF-203ENST00000564236 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
CCNF-203ENST00000564236 ACTR3CQ9C0K3 210 aaPredicted RBP11.23□□□□□ -0.61
CCNF-203ENST00000564236 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
CCNF-203ENST00000564236 PPT1P50897 306 aa11.22□□□□□ -0.61
CCNF-203ENST00000564236 ZFP69Q49AA0 526 aa11.22□□□□□ -0.61
CCNF-203ENST00000564236 ZNF506Q5JVG8 444 aa11.22□□□□□ -0.61
CCNF-203ENST00000564236 LELP1Q5T871 98 aa11.22□□□□□ -0.61
CCNF-203ENST00000564236 NTN5Q8WTR8 489 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms