RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 MSRB1Q9NZV6 116 aa6.53□□□□□ -1.36
CLN6-203ENST00000563917 EPM2AB3EWF7 344 aa6.52□□□□□ -1.37
CLN6-203ENST00000563917 PSCAO43653 123 aa6.52□□□□□ -1.37
CLN6-203ENST00000563917 CIDEAO60543 219 aa6.52□□□□□ -1.37
CLN6-203ENST00000563917 ZFP69Q49AA0 526 aa6.52□□□□□ -1.37
CLN6-203ENST00000563917 ASB13Q8WXK3 278 aa6.52□□□□□ -1.37
CLN6-203ENST00000563917 PRADC1Q9BSG0 188 aa6.52□□□□□ -1.37
CLN6-203ENST00000563917 SH3BGRL3Q9H299 93 aa6.52□□□□□ -1.37
CLN6-203ENST00000563917 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
CLN6-203ENST00000563917 TRAV8-6A0A0B4J262 113 aa6.51□□□□□ -1.37
CLN6-203ENST00000563917 FBLL1A6NHQ2 334 aaKnown RBP6.51□□□□□ -1.37
CLN6-203ENST00000563917 F6UZH7 168 aa6.51□□□□□ -1.37
CLN6-203ENST00000563917 GNRH2O43555 120 aa6.51□□□□□ -1.37
CLN6-203ENST00000563917 MBP02144 154 aa6.51□□□□□ -1.37
CLN6-203ENST00000563917 CRYGDP07320 174 aa6.51□□□□□ -1.37
CLN6-203ENST00000563917 PFN1P07737 140 aaKnown RBP6.51□□□□□ -1.37
CLN6-203ENST00000563917 CDC34P49427 236 aaPredicted RBP6.51□□□□□ -1.37
CLN6-203ENST00000563917 Q6ZRN7 208 aaPredicted RBP6.51□□□□□ -1.37
CLN6-203ENST00000563917 WFDC10BQ8IUB3 73 aa6.51□□□□□ -1.37
CLN6-203ENST00000563917 A0A087WTM6 91 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 IGHV3-38A0A0C4DH36 116 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 TAAR5O14804 337 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 HMGB3O15347 200 aaKnown RBP6.5□□□□□ -1.37
CLN6-203ENST00000563917 TYMSP04818 313 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 RAB2AP61019 212 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 IFITM3Q01628 133 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 ZNF876PQ49A33 203 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 OR10J3Q5JRS4 329 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 C5orf17Q8NAS9 161 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 FRZBQ92765 325 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 TNFRSF18Q9Y5U5 241 aa6.5□□□□□ -1.37
CLN6-203ENST00000563917 TRAV8-1A0A0A6YYK1 113 aa6.49□□□□□ -1.37
CLN6-203ENST00000563917 EIF3GO75821 320 aaKnown RBP eCLIP6.49□□□□□ -1.37
CLN6-203ENST00000563917 ARL14EPLP0DKL9 152 aa6.49□□□□□ -1.37
CLN6-203ENST00000563917 GATA1P15976 413 aaPredicted RBP6.49□□□□□ -1.37
CLN6-203ENST00000563917 GNG5P63218 68 aa6.49□□□□□ -1.37
CLN6-203ENST00000563917 RHOHQ15669 191 aa6.49□□□□□ -1.37
CLN6-203ENST00000563917 SMUG1Q53HV7 270 aa6.49□□□□□ -1.37
CLN6-203ENST00000563917 HSD17B11Q8NBQ5 300 aa6.49□□□□□ -1.37
CLN6-203ENST00000563917 TMEM167BQ9NRX6 74 aa6.49□□□□□ -1.37
CLN6-203ENST00000563917 CXorf1O96002 111 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 GCGP01275 180 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 TCRAP04437 139 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 STAG3L2P0CL84 134 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 STAG3L3P0CL85 134 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 GCSHP23434 173 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 S100A4P26447 101 aaKnown RBP6.48□□□□□ -1.37
CLN6-203ENST00000563917 TIRAPP58753 221 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 SERF2P84101 59 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 SAPCD1Q5SSQ6 148 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 INO80EQ8NBZ0 244 aaPredicted RBP6.48□□□□□ -1.37
CLN6-203ENST00000563917 SGK494Q96LW2 274 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 PSMG3Q9BT73 122 aaPredicted RBP6.48□□□□□ -1.37
CLN6-203ENST00000563917 ACTR3CQ9C0K3 210 aaPredicted RBP6.48□□□□□ -1.37
CLN6-203ENST00000563917 MED28Q9H204 178 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 WFDC1Q9HC57 220 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 PSG8Q9UQ74 426 aa6.48□□□□□ -1.37
CLN6-203ENST00000563917 LOC100131303A0A0U1RQF7 123 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 A6NHS1 94 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 GCHFRP30047 84 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 SUMO1P63165 101 aaKnown RBP6.47□□□□□ -1.37
CLN6-203ENST00000563917 FLI1Q01543 452 aaPredicted RBP6.47□□□□□ -1.37
CLN6-203ENST00000563917 LINC01556Q5JQF7 62 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 PRNTQ86SH4 94 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 CYB561D1Q8N8Q1 229 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 OR2G3Q8NGZ4 309 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
CLN6-203ENST00000563917 RYR1P21817 5038 aa6.46□□□□□ -1.37
CLN6-203ENST00000563917 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 BORCS7-ASMTA0A0B4J1R7 106 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 IGHV3-73A0A0B4J1V6 119 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 RS1O15537 224 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 IFNA7P01567 189 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 MGST1P10620 155 aaKnown RBP6.46□□□□□ -1.38
CLN6-203ENST00000563917 ATP6V0CP27449 155 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 CFAP126Q5VTH2 177 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 SLC25A29Q8N8R3 303 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 ATP6V0E2Q8NHE4 81 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
CLN6-203ENST00000563917 TVP23CQ96ET8 276 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 TM2D2Q9BX73 214 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 Q9HAA7 133 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 EPDR1Q9UM22 224 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 TNFSF18Q9UNG2 199 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 ALG5Q9Y673 324 aa6.46□□□□□ -1.38
CLN6-203ENST00000563917 A8MWV9 139 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 IBA57-AS1B1ANH7 110 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 INAFM2P0DMQ5 153 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 FUSP35637 526 aaKnown RBP eCLIP6.45□□□□□ -1.38
CLN6-203ENST00000563917 LGALSLQ3ZCW2 172 aaPredicted RBP6.45□□□□□ -1.38
CLN6-203ENST00000563917 LELP1Q5T871 98 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 TMEM75Q8N9X5 138 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 AQP10Q96PS8 301 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 GTSF1LQ9H1H1 148 aa6.45□□□□□ -1.38
CLN6-203ENST00000563917 HSPG2P98160 4391 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 A0A1W2PRE2 83 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 392.8 ms