RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 LINC00467Q9BRT7 94 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 MAP1LC3BQ9GZQ8 125 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 GGTLC3B5MD39 225 aa12.47□□□□□ -0.41
E4F1-203ENST00000563643 F5H768 121 aa12.47□□□□□ -0.41
E4F1-203ENST00000563643 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
E4F1-203ENST00000563643 LINC00315P59091 139 aa12.47□□□□□ -0.41
E4F1-203ENST00000563643 GNG5P63218 68 aa12.47□□□□□ -0.41
E4F1-203ENST00000563643 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
E4F1-203ENST00000563643 Q6ZRN7 208 aaPredicted RBP12.47□□□□□ -0.41
E4F1-203ENST00000563643 TCRAP04437 139 aa12.46□□□□□ -0.41
E4F1-203ENST00000563643 FHITP49789 147 aa12.46□□□□□ -0.41
E4F1-203ENST00000563643 FGF8P55075 233 aaPredicted RBP12.46□□□□□ -0.41
E4F1-203ENST00000563643 ERVFC1-1P60608 527 aa12.46□□□□□ -0.41
E4F1-203ENST00000563643 SUMO1P63165 101 aaKnown RBP12.46□□□□□ -0.41
E4F1-203ENST00000563643 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.41
E4F1-203ENST00000563643 TIMM8BQ9Y5J9 83 aaPredicted RBP12.46□□□□□ -0.41
E4F1-203ENST00000563643 DPPA3Q6W0C5 159 aa12.45□□□□□ -0.42
E4F1-203ENST00000563643 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
E4F1-203ENST00000563643 TRAV8-1A0A0A6YYK1 113 aa12.44□□□□□ -0.42
E4F1-203ENST00000563643 K7EQM0 130 aa12.44□□□□□ -0.42
E4F1-203ENST00000563643 FAM213BQ8TBF2 198 aa12.44□□□□□ -0.42
E4F1-203ENST00000563643 NKX6-2Q9C056 277 aaPredicted RBP12.44□□□□□ -0.42
E4F1-203ENST00000563643 FAM74A7A6NL05 159 aa12.43□□□□□ -0.42
E4F1-203ENST00000563643 UBE2G2P60604 165 aa12.43□□□□□ -0.42
E4F1-203ENST00000563643 ANXA2RQ3ZCQ2 193 aa12.43□□□□□ -0.42
E4F1-203ENST00000563643 Q6AWC8 147 aa12.43□□□□□ -0.42
E4F1-203ENST00000563643 EIF4E3Q8N5X7 224 aaKnown RBP12.43□□□□□ -0.42
E4F1-203ENST00000563643 CYB561D1Q8N8Q1 229 aa12.43□□□□□ -0.42
E4F1-203ENST00000563643 ZNF680Q8NEM1 530 aa12.43□□□□□ -0.42
E4F1-203ENST00000563643 MBD3L1Q8WWY6 194 aa12.43□□□□□ -0.42
E4F1-203ENST00000563643 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
E4F1-203ENST00000563643 RGS13O14921 159 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
E4F1-203ENST00000563643 Q6ZQT7 251 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 SFT2D1Q8WV19 159 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 TVP23CQ96ET8 276 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 FAT3Q8TDW7 4589 aa12.42□□□□□ -0.42
E4F1-203ENST00000563643 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 A0A1B0GVG6 124 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 FBLL1A6NHQ2 334 aaKnown RBP12.41□□□□□ -0.42
E4F1-203ENST00000563643 CBY3A6NI87 242 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 SNURFLB1AK76 121 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 IFNA7P01567 189 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 TMEM75Q8N9X5 138 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 C11orf72Q8NBR9 251 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 NDFIP1Q9BT67 221 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 TREM1Q9NP99 234 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 ARL2-SNX15V9GYD0 113 aa12.41□□□□□ -0.42
E4F1-203ENST00000563643 IGLV2-11P01706 119 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 GCSHP23434 173 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 RAB5CP51148 216 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 FLI1Q01543 452 aaPredicted RBP12.4□□□□□ -0.42
E4F1-203ENST00000563643 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
E4F1-203ENST00000563643 ZFP69Q49AA0 526 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 IBA57Q5T440 356 aaKnown RBP12.4□□□□□ -0.42
E4F1-203ENST00000563643 C9orf62Q8N4C0 152 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 DEFB104AQ8WTQ1 72 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 SGK494Q96LW2 274 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 PSG8Q9UQ74 426 aa12.4□□□□□ -0.42
E4F1-203ENST00000563643 ATP5G1P05496 136 aa12.39□□□□□ -0.43
E4F1-203ENST00000563643 H2AFB1P0C5Y9 115 aa12.39□□□□□ -0.43
E4F1-203ENST00000563643 ATP5G3P48201 142 aa12.39□□□□□ -0.43
E4F1-203ENST00000563643 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
E4F1-203ENST00000563643 TCEAL7Q9BRU2 100 aa12.39□□□□□ -0.43
E4F1-203ENST00000563643 F6UZH7 168 aa12.38□□□□□ -0.43
E4F1-203ENST00000563643 PEX7O00628 323 aa12.38□□□□□ -0.43
E4F1-203ENST00000563643 TCL1AP56279 114 aa12.38□□□□□ -0.43
E4F1-203ENST00000563643 TP53TG3Q9ULZ0 132 aa12.38□□□□□ -0.43
E4F1-203ENST00000563643 TRAV21A0A0B4J279 112 aa12.37□□□□□ -0.43
E4F1-203ENST00000563643 PLA2G1BP04054 148 aaKnown RBP12.37□□□□□ -0.43
E4F1-203ENST00000563643 TDRG1Q3Y452 100 aa12.37□□□□□ -0.43
E4F1-203ENST00000563643 MUC21Q5SSG8 566 aa12.37□□□□□ -0.43
E4F1-203ENST00000563643 SAPCD1Q5SSQ6 148 aa12.37□□□□□ -0.43
E4F1-203ENST00000563643 CST9LP1Q5W188 147 aa12.37□□□□□ -0.43
E4F1-203ENST00000563643 PRNTQ86SH4 94 aa12.37□□□□□ -0.43
E4F1-203ENST00000563643 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 A0A1B0GV50 99 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 PAGE4O60829 102 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 SULT1A2P50226 295 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 PPT1P50897 306 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 LINC00479Q96M42 142 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 MRPS16Q9Y3D3 137 aaKnown RBP12.36□□□□□ -0.43
E4F1-203ENST00000563643 KLF12Q9Y4X4 402 aa12.36□□□□□ -0.43
E4F1-203ENST00000563643 LRP2P98164 4655 aa12.35□□□□□ -0.43
E4F1-203ENST00000563643 TRGV11A0A075B6L2 103 aa12.35□□□□□ -0.43
E4F1-203ENST00000563643 A0A087WTM6 91 aa12.35□□□□□ -0.43
E4F1-203ENST00000563643 TRAV34A0A0B4J273 112 aa12.35□□□□□ -0.43
E4F1-203ENST00000563643 GAGE12BA1L429 117 aa12.35□□□□□ -0.43
E4F1-203ENST00000563643 GAGE7O76087 117 aa12.35□□□□□ -0.43
E4F1-203ENST00000563643 GAGE12FP0CL80 117 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms