RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 F6UZH7 168 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 H0YIZ8 118 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 EIF3GO75821 320 aaKnown RBP eCLIP8.74□□□□□ -1.01
SF3B3-202ENST00000562722 CYCSP99999 105 aaKnown RBP8.74□□□□□ -1.01
SF3B3-202ENST00000562722 OR10J3Q5JRS4 329 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 Q6ZSN1 163 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 GOLT1AQ6ZVE7 132 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 TMED6Q8WW62 240 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 OTORQ9NRC9 128 aa8.74□□□□□ -1.01
SF3B3-202ENST00000562722 PGPA6NDG6 321 aa8.73□□□□□ -1.01
SF3B3-202ENST00000562722 FBLL1A6NHQ2 334 aaKnown RBP8.73□□□□□ -1.01
SF3B3-202ENST00000562722 TYMSP04818 313 aa8.73□□□□□ -1.01
SF3B3-202ENST00000562722 TDRG1Q3Y452 100 aa8.73□□□□□ -1.01
SF3B3-202ENST00000562722 NTN5Q8WTR8 489 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-202ENST00000562722 SMIM3Q9BZL3 60 aa8.73□□□□□ -1.01
SF3B3-202ENST00000562722 TREM1Q9NP99 234 aa8.73□□□□□ -1.01
SF3B3-202ENST00000562722 MBD2Q9UBB5 411 aa8.73□□□□□ -1.01
SF3B3-202ENST00000562722 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
SF3B3-202ENST00000562722 PFN1P07737 140 aaKnown RBP8.72□□□□□ -1.01
SF3B3-202ENST00000562722 GATA1P15976 413 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-202ENST00000562722 ASAH1Q13510 395 aa8.72□□□□□ -1.01
SF3B3-202ENST00000562722 ASB13Q8WXK3 278 aa8.72□□□□□ -1.01
SF3B3-202ENST00000562722 KCNS1Q96KK3 526 aa8.72□□□□□ -1.01
SF3B3-202ENST00000562722 TMEM70Q9BUB7 260 aa8.72□□□□□ -1.01
SF3B3-202ENST00000562722 NDUFA13Q9P0J0 144 aa8.72□□□□□ -1.01
SF3B3-202ENST00000562722 TRAV8-1A0A0A6YYK1 113 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 IGHV3-73A0A0B4J1V6 119 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 A0A1W2PPV4 95 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 LRCOL1A6NCL2 159 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 PET100P0DJ07 73 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 TIRAPP58753 221 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 ZNF876PQ49A33 203 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 LINC01556Q5JQF7 62 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 Q8N814 137 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 PPP1R1CQ8WVI7 109 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 PRADC1Q9BSG0 188 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 NDFIP1Q9BT67 221 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 HSPB11Q9Y547 144 aa8.71□□□□□ -1.02
SF3B3-202ENST00000562722 IBA57-AS1B1ANH7 110 aa8.7□□□□□ -1.02
SF3B3-202ENST00000562722 J3QL48 77 aa8.7□□□□□ -1.02
SF3B3-202ENST00000562722 GNG5P63218 68 aa8.7□□□□□ -1.02
SF3B3-202ENST00000562722 RHOHQ15669 191 aa8.7□□□□□ -1.02
SF3B3-202ENST00000562722 ACOT6Q3I5F7 207 aaPredicted RBP8.7□□□□□ -1.02
SF3B3-202ENST00000562722 SLC25A29Q8N8R3 303 aa8.7□□□□□ -1.02
SF3B3-202ENST00000562722 SGK494Q96LW2 274 aa8.7□□□□□ -1.02
SF3B3-202ENST00000562722 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
SF3B3-202ENST00000562722 SSNA1O43805 119 aa8.69□□□□□ -1.02
SF3B3-202ENST00000562722 RPL12P30050 165 aaKnown RBP8.69□□□□□ -1.02
SF3B3-202ENST00000562722 H2BFSP57053 126 aa8.69□□□□□ -1.02
SF3B3-202ENST00000562722 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
SF3B3-202ENST00000562722 S100ZQ8WXG8 99 aa8.69□□□□□ -1.02
SF3B3-202ENST00000562722 TVP23CQ96ET8 276 aa8.69□□□□□ -1.02
SF3B3-202ENST00000562722 INMT-MINDY4F8WBC2 141 aa8.68□□□□□ -1.02
SF3B3-202ENST00000562722 MPC2O95563 127 aa8.68□□□□□ -1.02
SF3B3-202ENST00000562722 RAB2AP61019 212 aa8.68□□□□□ -1.02
SF3B3-202ENST00000562722 LELP1Q5T871 98 aa8.68□□□□□ -1.02
SF3B3-202ENST00000562722 CFAP126Q5VTH2 177 aa8.68□□□□□ -1.02
SF3B3-202ENST00000562722 TRBV6-4A0A1B0GX49 114 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 RS1O15537 224 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 CIDEAO60543 219 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 ARL6IP6Q8N6S5 226 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 OR10G9Q8NGN4 311 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 OR10G7Q8NGN6 311 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 TM2D2Q9BX73 214 aa8.67□□□□□ -1.02
SF3B3-202ENST00000562722 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-202ENST00000562722 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 K7EQM0 130 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 TAAR5O14804 337 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 UPK1BO75841 260 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 GCGP01275 180 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 ZFP69Q49AA0 526 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 DPPA3Q6W0C5 159 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 GTSF1LQ9H1H1 148 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
SF3B3-202ENST00000562722 SERTM2A0A1B0GWG4 89 aa8.65□□□□□ -1.02
SF3B3-202ENST00000562722 LECT2O14960 151 aa8.65□□□□□ -1.02
SF3B3-202ENST00000562722 ARL14EPLP0DKL9 152 aa8.65□□□□□ -1.02
SF3B3-202ENST00000562722 MGST1P10620 155 aaKnown RBP8.65□□□□□ -1.02
SF3B3-202ENST00000562722 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
SF3B3-202ENST00000562722 LAGE3Q14657 143 aa8.65□□□□□ -1.02
SF3B3-202ENST00000562722 LINC00299Q6ZSB3 139 aa8.65□□□□□ -1.02
SF3B3-202ENST00000562722 TMEM75Q8N9X5 138 aa8.65□□□□□ -1.02
SF3B3-202ENST00000562722 WFDC1Q9HC57 220 aa8.65□□□□□ -1.02
SF3B3-202ENST00000562722 PGPEP1LA6NFU8 196 aa8.64□□□□□ -1.03
SF3B3-202ENST00000562722 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
SF3B3-202ENST00000562722 TCRAP04437 139 aa8.64□□□□□ -1.03
SF3B3-202ENST00000562722 CDC34P49427 236 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-202ENST00000562722 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
SF3B3-202ENST00000562722 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
SF3B3-202ENST00000562722 C5orf17Q8NAS9 161 aa8.64□□□□□ -1.03
SF3B3-202ENST00000562722 SH3BGRL3Q9H299 93 aa8.64□□□□□ -1.03
SF3B3-202ENST00000562722 C11orf21Q9P2W6 132 aa8.64□□□□□ -1.03
SF3B3-202ENST00000562722 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-202ENST00000562722 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms