RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 TRAPPC8Q9Y2L5 1435 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 KMT2AQ03164 3969 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 FLNAP21333 2647 aaKnown RBP-0.35□□□□□ -2.47
USP8-218ENST00000561330 GABARAPH6UMI1 98 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 MFSD11O43934 449 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 APOC1P02654 83 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 NMBP08949 121 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 SDC4P31431 198 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 SDC2P34741 201 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 GLRXP35754 106 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 BASP1P80723 227 aaKnown RBP-0.35□□□□□ -2.47
USP8-218ENST00000561330 Q5XG85 94 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 FAM24BQ8N5W8 94 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 CHMP6Q96FZ7 201 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 TMEM141Q96I45 108 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 CARD19Q96LW7 228 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 LRTM1Q9HBL6 345 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 LAMTOR3Q9UHA4 124 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 CPDO75976 1380 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.35□□□□□ -2.47
USP8-218ENST00000561330 MYCBP2O75592 4640 aa-0.35□□□□□ -2.47
USP8-218ENST00000561330 VIRMAQ69YN4 1812 aaKnown RBP-0.36□□□□□ -2.47
USP8-218ENST00000561330 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.36□□□□□ -2.47
USP8-218ENST00000561330 TRAV17A0A0B4J275 112 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 TRDV1A0A1B0GX56 115 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 IFITM5A6NNB3 132 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 ZNF670-ZNF695F2Z2N8 137 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 H7BYZ3 331 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 E2F6O75461 281 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 TFF1P04155 84 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 POLR2JP52435 117 aaKnown RBP-0.36□□□□□ -2.47
USP8-218ENST00000561330 CCSMST1Q4G0I0 132 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 LINC00305Q7Z4B0 112 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 SMIM20Q8N5G0 67 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 OR5A2Q8NGI9 324 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 PPP1R1CQ8WVI7 109 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 AP3S1Q92572 193 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 BPESC1Q9GZL8 116 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 C19orf12Q9NSK7 152 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 NUBP2Q9Y5Y2 271 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 DCHS2Q6V1P9 2916 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 KIF13AQ9H1H9 1805 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 AKAP11Q9UKA4 1901 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 MUC2Q02817 5179 aa-0.36□□□□□ -2.47
USP8-218ENST00000561330 TECPR2O15040 1411 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 BLMP54132 1417 aaPredicted RBP-0.37□□□□□ -2.47
USP8-218ENST00000561330 ZNF292O60281 2723 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 PYYP10082 97 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 SLC25A4P12235 298 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 S100A11P31949 105 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 CKS2P33552 79 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 TAS2R41P59536 307 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 BLCAPP62952 87 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 GNG3P63215 75 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 RPL19P84098 196 aaKnown RBP-0.37□□□□□ -2.47
USP8-218ENST00000561330 STX19Q8N4C7 294 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 OR51A4Q8NGJ6 313 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 NAT14Q8WUY8 206 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 BET1LQ9NYM9 111 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 MAP1BP46821 2468 aaKnown RBP-0.37□□□□□ -2.47
USP8-218ENST00000561330 PLXNA1Q9UIW2 1896 aa-0.37□□□□□ -2.47
USP8-218ENST00000561330 SPTBN1Q01082 2364 aaKnown RBP-0.38□□□□□ -2.47
USP8-218ENST00000561330 CSMD3Q7Z407 3707 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 LRP5O75197 1615 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 KIAA0100Q14667 2235 aaKnown RBP-0.38□□□□□ -2.47
USP8-218ENST00000561330 PKD1L1Q8TDX9 2849 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 TRAV12-2A0A075B6T6 113 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 TRAV13-1A0A0B4J241 112 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 IGHV1-24A0A0C4DH33 117 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 TRBV10-1A0A0K0K1A3 114 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 PPP5D1E7EU14 171 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 H3BMG7 143 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 APODP05090 189 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 CRYGSP22914 178 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 TCTAP57738 103 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 LSM3P62310 102 aaKnown RBP-0.38□□□□□ -2.47
USP8-218ENST00000561330 LXNQ9BS40 222 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 EIF3AQ14152 1382 aaKnown RBP-0.38□□□□□ -2.47
USP8-218ENST00000561330 TCOF1Q13428 1488 aaKnown RBP-0.38□□□□□ -2.47
USP8-218ENST00000561330 LPAP08519 4548 aa-0.38□□□□□ -2.47
USP8-218ENST00000561330 CDK13Q14004 1512 aaKnown RBP-0.38□□□□□ -2.47
USP8-218ENST00000561330 C2CD3Q4AC94 2353 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 PLXNA2O75051 1894 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 CSPG4Q6UVK1 2322 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 TRBV27A0A0K0K1C4 114 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 TEX49A0A1B0GTD5 131 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 IFNA21P01568 189 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 ADCYAP1P18509 176 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 CRYBA4P53673 196 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 ELOF1P60002 83 aaKnown RBP-0.39□□□□□ -2.47
USP8-218ENST00000561330 TMED4Q7Z7H5 227 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 OTOSQ8NHW6 89 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 SMIM11BQ8TCY0 68 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 STOML2Q9UJZ1 356 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 LAMTOR2Q9Y2Q5 125 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 HECTD4Q9Y4D8 3996 aa-0.39□□□□□ -2.47
USP8-218ENST00000561330 KIDINS220Q9ULH0 1771 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 WNK1Q9H4A3 2382 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 PARP14Q460N5 1801 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 GVQW2A0A096LPI5 108 aaPredicted RBP-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms