RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 SAPCD1Q5SSQ6 148 aa14□□□□□ -0.17
TSPAN3-210ENST00000561277 Q86TA4 180 aa14□□□□□ -0.17
TSPAN3-210ENST00000561277 ARL2-SNX15V9GYD0 113 aa14□□□□□ -0.17
TSPAN3-210ENST00000561277 GNRH2O43555 120 aa13.99□□□□□ -0.17
TSPAN3-210ENST00000561277 P0DMU3 169 aa13.99□□□□□ -0.17
TSPAN3-210ENST00000561277 FAM231AP0DMU4 169 aa13.99□□□□□ -0.17
TSPAN3-210ENST00000561277 FAM231CP0DMU5 169 aa13.99□□□□□ -0.17
TSPAN3-210ENST00000561277 RAB5CP51148 216 aa13.99□□□□□ -0.17
TSPAN3-210ENST00000561277 TDRG1Q3Y452 100 aa13.99□□□□□ -0.17
TSPAN3-210ENST00000561277 SDF2L1Q9HCN8 221 aa13.99□□□□□ -0.17
TSPAN3-210ENST00000561277 PFN1P07737 140 aaKnown RBP13.98□□□□□ -0.17
TSPAN3-210ENST00000561277 HOXA5P20719 270 aa13.98□□□□□ -0.17
TSPAN3-210ENST00000561277 C15orf53Q8NAA6 179 aa13.98□□□□□ -0.17
TSPAN3-210ENST00000561277 NUDT3O95989 172 aa13.97□□□□□ -0.17
TSPAN3-210ENST00000561277 TYMSP04818 313 aa13.97□□□□□ -0.17
TSPAN3-210ENST00000561277 SULT1A2P50226 295 aa13.97□□□□□ -0.17
TSPAN3-210ENST00000561277 UBE2G1P62253 170 aa13.97□□□□□ -0.17
TSPAN3-210ENST00000561277 TCEAL7Q9BRU2 100 aa13.97□□□□□ -0.17
TSPAN3-210ENST00000561277 TRAV26-1A0A087WT03 109 aa13.96□□□□□ -0.17
TSPAN3-210ENST00000561277 AKR1C3P42330 323 aa13.96□□□□□ -0.17
TSPAN3-210ENST00000561277 LGALS9BQ3B8N2 356 aa13.96□□□□□ -0.17
TSPAN3-210ENST00000561277 UBE2DNLQ8IWF7 75 aa13.96□□□□□ -0.17
TSPAN3-210ENST00000561277 FMC1Q96HJ9 113 aa13.96□□□□□ -0.17
TSPAN3-210ENST00000561277 KCNS1Q96KK3 526 aa13.96□□□□□ -0.17
TSPAN3-210ENST00000561277 C11orf21Q9P2W6 132 aa13.96□□□□□ -0.17
TSPAN3-210ENST00000561277 IGHV3-16A0A0C4DH30 117 aa13.96□□□□□ -0.18
TSPAN3-210ENST00000561277 A0A0J9YY99 117 aa13.96□□□□□ -0.18
TSPAN3-210ENST00000561277 IGHV3-53P01767 116 aa13.96□□□□□ -0.18
TSPAN3-210ENST00000561277 C18orf15Q96N68 181 aa13.96□□□□□ -0.18
TSPAN3-210ENST00000561277 GNG13Q9P2W3 67 aa13.96□□□□□ -0.18
TSPAN3-210ENST00000561277 SCO2A0A1W2PP80 73 aa13.95□□□□□ -0.18
TSPAN3-210ENST00000561277 NKX2-5P52952 324 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-210ENST00000561277 CCL20P78556 96 aa13.95□□□□□ -0.18
TSPAN3-210ENST00000561277 POM121L12Q8N7R1 296 aa13.94□□□□□ -0.18
TSPAN3-210ENST00000561277 SPXQ9BT56 116 aa13.94□□□□□ -0.18
TSPAN3-210ENST00000561277 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
TSPAN3-210ENST00000561277 TRAV1-1A0A0B4J248 108 aa13.92□□□□□ -0.18
TSPAN3-210ENST00000561277 TEX46H3BTG2 121 aa13.92□□□□□ -0.18
TSPAN3-210ENST00000561277 ZC2HC1AQ96GY0 325 aa13.92□□□□□ -0.18
TSPAN3-210ENST00000561277 ZFP30Q9Y2G7 519 aa13.92□□□□□ -0.18
TSPAN3-210ENST00000561277 FABP5P3A8MUU1 101 aa13.91□□□□□ -0.18
TSPAN3-210ENST00000561277 M0R2P5 195 aa13.91□□□□□ -0.18
TSPAN3-210ENST00000561277 ALKAL2Q6UX46 152 aa13.91□□□□□ -0.18
TSPAN3-210ENST00000561277 RASL10AQ92737 203 aa13.91□□□□□ -0.18
TSPAN3-210ENST00000561277 LTAP01374 205 aa13.9□□□□□ -0.18
TSPAN3-210ENST00000561277 SFTA3P0C7M3 94 aa13.9□□□□□ -0.18
TSPAN3-210ENST00000561277 NHLRC2Q8NBF2 726 aa13.9□□□□□ -0.18
TSPAN3-210ENST00000561277 MUC4Q99102 2169 aa13.89□□□□□ -0.19
TSPAN3-210ENST00000561277 TRBV6-1A0A0K0K1D8 114 aa13.89□□□□□ -0.19
TSPAN3-210ENST00000561277 CRIP1P50238 77 aa13.89□□□□□ -0.19
TSPAN3-210ENST00000561277 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
TSPAN3-210ENST00000561277 IGKV3D-20A0A0C4DH25 116 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 M0R036 132 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 SH2D1AO60880 128 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 ORM1P02763 201 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 RNF212Q495C1 297 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 VSIG2Q96IQ7 327 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 ZNF479Q96JC4 524 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 C9JCJ5 164 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 FAM162BQ5T6X4 162 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 COX8CQ7Z4L0 72 aa13.88□□□□□ -0.19
TSPAN3-210ENST00000561277 DNAH6Q9C0G6 4158 aa13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 IGLV2-18A0A075B6J9 118 aa13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 TRGV4A0A0C4DH28 118 aa13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 B4DEV8 164 aa13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 H3BNG1 76 aa13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 IFNA1P01562 189 aa13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 S100A9P06702 114 aaKnown RBP13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 S100A4P26447 101 aaKnown RBP13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 ZNF876PQ49A33 203 aa13.87□□□□□ -0.19
TSPAN3-210ENST00000561277 PAX4O43316 350 aa13.86□□□□□ -0.19
TSPAN3-210ENST00000561277 RNASE3P12724 160 aaKnown RBP13.86□□□□□ -0.19
TSPAN3-210ENST00000561277 FHL2Q14192 279 aa13.86□□□□□ -0.19
TSPAN3-210ENST00000561277 BAGE2Q86Y30 109 aa13.86□□□□□ -0.19
TSPAN3-210ENST00000561277 C9orf85Q96MD7 179 aa13.86□□□□□ -0.19
TSPAN3-210ENST00000561277 PRO0255Q9UI72 69 aa13.86□□□□□ -0.19
TSPAN3-210ENST00000561277 TRAV4A0A0B4J268 109 aa13.85□□□□□ -0.19
TSPAN3-210ENST00000561277 M0R2N4 97 aa13.85□□□□□ -0.19
TSPAN3-210ENST00000561277 ASIPP42127 132 aa13.85□□□□□ -0.19
TSPAN3-210ENST00000561277 CCL18P55774 89 aa13.85□□□□□ -0.19
TSPAN3-210ENST00000561277 OR4C5Q8NGB2 326 aa13.85□□□□□ -0.19
TSPAN3-210ENST00000561277 DERL1Q9BUN8 251 aa13.85□□□□□ -0.19
TSPAN3-210ENST00000561277 HHLA3Q9XRX5 114 aa13.85□□□□□ -0.19
TSPAN3-210ENST00000561277 NACAE9PAV3 2078 aa13.84□□□□□ -0.19
TSPAN3-210ENST00000561277 BCL2P10415 239 aa13.84□□□□□ -0.19
TSPAN3-210ENST00000561277 RPL35P42766 123 aaKnown RBP13.84□□□□□ -0.19
TSPAN3-210ENST00000561277 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
TSPAN3-210ENST00000561277 ZNF674Q2M3X9 581 aa13.84□□□□□ -0.19
TSPAN3-210ENST00000561277 C11orf52Q96A22 123 aa13.84□□□□□ -0.19
TSPAN3-210ENST00000561277 LINC00588Q9Y4M8 146 aa13.84□□□□□ -0.19
TSPAN3-210ENST00000561277 TMSB15BA0A087X1C1 80 aa13.83□□□□□ -0.19
TSPAN3-210ENST00000561277 A0A096LPF7 62 aa13.83□□□□□ -0.19
TSPAN3-210ENST00000561277 GRIFINA4D1Z8 144 aa13.83□□□□□ -0.19
TSPAN3-210ENST00000561277 CRYBA4P53673 196 aa13.83□□□□□ -0.19
TSPAN3-210ENST00000561277 SLAQ13239 276 aa13.83□□□□□ -0.19
TSPAN3-210ENST00000561277 TXNDC17Q9BRA2 123 aa13.83□□□□□ -0.19
TSPAN3-210ENST00000561277 EPPK1P58107 5090 aaKnown RBP13.83□□□□□ -0.2
TSPAN3-210ENST00000561277 PGPEP1LA6NFU8 196 aa13.83□□□□□ -0.2
TSPAN3-210ENST00000561277 KRBOX1C9JBD0 128 aa13.83□□□□□ -0.2
TSPAN3-210ENST00000561277 H3BVH4 76 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms