RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SPXQ9BT56 116 aa9.07□□□□□ -0.96
CTDSPL2-209ENST00000560620 hCG_2014768A0A024R1R8 64 aa9.06□□□□□ -0.96
CTDSPL2-209ENST00000560620 FAM74A7A6NL05 159 aa9.06□□□□□ -0.96
CTDSPL2-209ENST00000560620 PEX7O00628 323 aa9.06□□□□□ -0.96
CTDSPL2-209ENST00000560620 TPT1P13693 172 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-209ENST00000560620 SAPCD1Q5SSQ6 148 aa9.06□□□□□ -0.96
CTDSPL2-209ENST00000560620 VPS13DQ5THJ4 4388 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 TRGV4A0A0C4DH28 118 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 PAX4O43316 350 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 TYMSP04818 313 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 PFN1P07737 140 aaKnown RBP9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 ZNF80P51504 273 aaPredicted RBP9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 FAM3BP58499 235 aaPredicted RBP9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 UBE2G1P62253 170 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 TDRG1Q3Y452 100 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 HIST1H2BAQ96A08 127 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 C18orf15Q96N68 181 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 ARL2-SNX15V9GYD0 113 aa9.05□□□□□ -0.96
CTDSPL2-209ENST00000560620 IGHV3-16A0A0C4DH30 117 aa9.04□□□□□ -0.96
CTDSPL2-209ENST00000560620 H3BNG1 76 aa9.04□□□□□ -0.96
CTDSPL2-209ENST00000560620 SFTA3P0C7M3 94 aa9.04□□□□□ -0.96
CTDSPL2-209ENST00000560620 HHLA3Q9XRX5 114 aa9.04□□□□□ -0.96
CTDSPL2-209ENST00000560620 LINC00588Q9Y4M8 146 aa9.04□□□□□ -0.96
CTDSPL2-209ENST00000560620 C9JCJ5 164 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 M0R2P5 195 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 PAGE4O60829 102 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 SLAQ13239 276 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 DPPA3Q6W0C5 159 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 OR4C5Q8NGB2 326 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 RASL10AQ92737 203 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 ICOSQ9Y6W8 199 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
CTDSPL2-209ENST00000560620 S100A4P26447 101 aaKnown RBP9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 SOHLH1Q5JUK2 328 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 EIF5AL1Q6IS14 154 aaKnown RBP9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 Q6ZNX1 250 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 Q86TA4 180 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 TCTE3Q8IZS6 198 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 MBD3L1Q8WWY6 194 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 FMC1Q96HJ9 113 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 VSIG2Q96IQ7 327 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 ZNF479Q96JC4 524 aa9.02□□□□□ -0.97
CTDSPL2-209ENST00000560620 A0A096LPF7 62 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 FABP5P3A8MUU1 101 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 ORM1P02763 201 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 AKR1C3P42330 323 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 FHL2Q14192 279 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 LGALSLQ3ZCW2 172 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 LINC00336Q6ZUF6 198 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 AKAP14Q86UN6 197 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 ZNRF2Q8NHG8 242 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 PCNPQ8WW12 178 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 MUC4Q99102 2169 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 TCEAL7Q9BRU2 100 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
CTDSPL2-209ENST00000560620 TRAV4A0A0B4J268 109 aa9□□□□□ -0.97
CTDSPL2-209ENST00000560620 C1QBP02746 253 aa9□□□□□ -0.97
CTDSPL2-209ENST00000560620 CRYBA4P53673 196 aa9□□□□□ -0.97
CTDSPL2-209ENST00000560620 ESRGQ1W209 222 aa9□□□□□ -0.97
CTDSPL2-209ENST00000560620 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
CTDSPL2-209ENST00000560620 Q9H8V8 135 aa9□□□□□ -0.97
CTDSPL2-209ENST00000560620 ZFP30Q9Y2G7 519 aa9□□□□□ -0.97
CTDSPL2-209ENST00000560620 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 NBDYA0A0U1RRE5 68 aa8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 B4DEV8 164 aa8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 TEX46H3BTG2 121 aa8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 M0R036 132 aa8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 Q6ZR54 194 aa8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 GNG13Q9P2W3 67 aa8.99□□□□□ -0.97
CTDSPL2-209ENST00000560620 PRSS29PA6NIE9 313 aa8.98□□□□□ -0.97
CTDSPL2-209ENST00000560620 SRIP30626 198 aa8.98□□□□□ -0.97
CTDSPL2-209ENST00000560620 ASIPP42127 132 aa8.98□□□□□ -0.97
CTDSPL2-209ENST00000560620 RAB5CP51148 216 aa8.98□□□□□ -0.97
CTDSPL2-209ENST00000560620 NHLRC2Q8NBF2 726 aa8.98□□□□□ -0.97
CTDSPL2-209ENST00000560620 ZC2HC1AQ96GY0 325 aa8.98□□□□□ -0.97
CTDSPL2-209ENST00000560620 MRPS16Q9Y3D3 137 aaKnown RBP8.98□□□□□ -0.97
CTDSPL2-209ENST00000560620 IGHV3-73A0A0B4J1V6 119 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 RTL8CO15255 209 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 GYPEP15421 78 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 FAM162BQ5T6X4 162 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 NEGR1Q7Z3B1 354 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 SLC51BQ86UW2 128 aa8.97□□□□□ -0.97
CTDSPL2-209ENST00000560620 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.97
CTDSPL2-209ENST00000560620 TMSB15BA0A087X1C1 80 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 GRIFINA4D1Z8 144 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 PGPEP1LA6NFU8 196 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 K7EQD1 137 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 SH2D1AO60880 128 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 LTAP01374 205 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 S100A9P06702 114 aaKnown RBP8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 RNASE3P12724 160 aaKnown RBP8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
CTDSPL2-209ENST00000560620 ZNF506Q5JVG8 444 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms