RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 F6UZH7 168 aa12.15□□□□□ -0.46
SMAD3-210ENST00000559092 M0R2P5 195 aa12.15□□□□□ -0.46
SMAD3-210ENST00000559092 GNRH2O43555 120 aa12.15□□□□□ -0.46
SMAD3-210ENST00000559092 BTF3P20290 206 aaKnown RBP12.15□□□□□ -0.46
SMAD3-210ENST00000559092 SAPCD1Q5SSQ6 148 aa12.15□□□□□ -0.46
SMAD3-210ENST00000559092 AKR1C8PQ5T2L2 129 aa12.15□□□□□ -0.46
SMAD3-210ENST00000559092 CYB561D1Q8N8Q1 229 aa12.15□□□□□ -0.46
SMAD3-210ENST00000559092 TMEM75Q8N9X5 138 aa12.15□□□□□ -0.46
SMAD3-210ENST00000559092 NKX6-2Q9C056 277 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-210ENST00000559092 TRGV4A0A0C4DH28 118 aa12.14□□□□□ -0.47
SMAD3-210ENST00000559092 ARPC5O15511 151 aa12.14□□□□□ -0.47
SMAD3-210ENST00000559092 IGLV2-11P01706 119 aa12.14□□□□□ -0.47
SMAD3-210ENST00000559092 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
SMAD3-210ENST00000559092 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
SMAD3-210ENST00000559092 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
SMAD3-210ENST00000559092 SGK494Q96LW2 274 aa12.14□□□□□ -0.47
SMAD3-210ENST00000559092 C8orf49Q96NF6 230 aa12.14□□□□□ -0.47
SMAD3-210ENST00000559092 CYTL1Q9NRR1 136 aa12.14□□□□□ -0.47
SMAD3-210ENST00000559092 HERC2O95714 4834 aa12.13□□□□□ -0.47
SMAD3-210ENST00000559092 TYMSP04818 313 aa12.13□□□□□ -0.47
SMAD3-210ENST00000559092 PFN1P07737 140 aaKnown RBP12.13□□□□□ -0.47
SMAD3-210ENST00000559092 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
SMAD3-210ENST00000559092 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
SMAD3-210ENST00000559092 TRAV4A0A0B4J268 109 aa12.12□□□□□ -0.47
SMAD3-210ENST00000559092 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
SMAD3-210ENST00000559092 MUC4Q99102 2169 aa12.12□□□□□ -0.47
SMAD3-210ENST00000559092 GCGP01275 180 aa12.11□□□□□ -0.47
SMAD3-210ENST00000559092 IFNA7P01567 189 aa12.11□□□□□ -0.47
SMAD3-210ENST00000559092 ORM1P02763 201 aa12.11□□□□□ -0.47
SMAD3-210ENST00000559092 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-210ENST00000559092 ZNF345Q14585 488 aa12.11□□□□□ -0.47
SMAD3-210ENST00000559092 NEGR1Q7Z3B1 354 aa12.11□□□□□ -0.47
SMAD3-210ENST00000559092 PRNTQ86SH4 94 aa12.11□□□□□ -0.47
SMAD3-210ENST00000559092 OR4C5Q8NGB2 326 aa12.11□□□□□ -0.47
SMAD3-210ENST00000559092 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 PPT1P50897 306 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 LYPD5Q6UWN5 251 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 KCNRGQ8N5I3 272 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 HIST1H2BAQ96A08 127 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 DNAH11Q96DT5 4516 aa12.1□□□□□ -0.47
SMAD3-210ENST00000559092 FAM74A7A6NL05 159 aa12.09□□□□□ -0.47
SMAD3-210ENST00000559092 CIDEAO60543 219 aa12.09□□□□□ -0.47
SMAD3-210ENST00000559092 TNP2Q05952 138 aa12.09□□□□□ -0.47
SMAD3-210ENST00000559092 STOML3Q8TAV4 291 aa12.09□□□□□ -0.47
SMAD3-210ENST00000559092 PCNPQ8WW12 178 aaKnown RBP12.09□□□□□ -0.47
SMAD3-210ENST00000559092 PTH2Q96A98 100 aa12.09□□□□□ -0.47
SMAD3-210ENST00000559092 KRTAP1-5Q9BYS1 174 aa12.09□□□□□ -0.47
SMAD3-210ENST00000559092 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
SMAD3-210ENST00000559092 A0A0D9SG52 128 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 C9JCJ5 164 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 SMLR1H3BR10 107 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 K7EQD1 137 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 SIVA1O15304 175 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 SRIP30626 198 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 FGF8P55075 233 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-210ENST00000559092 UBE2G2P60604 165 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 ZNF876PQ49A33 203 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 LINC00479Q96M42 142 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 TCEAL7Q9BRU2 100 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
SMAD3-210ENST00000559092 TRAV34A0A0B4J273 112 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 PEX7O00628 323 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 NXPH4O95158 308 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 GYPEP15421 78 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 FHITP49789 147 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 SH2D6Q7Z4S9 175 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 C9orf85Q96MD7 179 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 TXNDC17Q9BRA2 123 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
SMAD3-210ENST00000559092 FABP5P3A8MUU1 101 aa12.06□□□□□ -0.48
SMAD3-210ENST00000559092 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
SMAD3-210ENST00000559092 SEC11BP0C7V7 166 aa12.06□□□□□ -0.48
SMAD3-210ENST00000559092 ZFP30Q9Y2G7 519 aa12.06□□□□□ -0.48
SMAD3-210ENST00000559092 DYNC1H1Q14204 4646 aaKnown RBP12.05□□□□□ -0.48
SMAD3-210ENST00000559092 K7EP13 123 aa12.05□□□□□ -0.48
SMAD3-210ENST00000559092 COX8CQ7Z4L0 72 aa12.05□□□□□ -0.48
SMAD3-210ENST00000559092 OR11H4Q8NGC9 324 aa12.05□□□□□ -0.48
SMAD3-210ENST00000559092 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
SMAD3-210ENST00000559092 RS1O15537 224 aa12.04□□□□□ -0.48
SMAD3-210ENST00000559092 RNASE3P12724 160 aaKnown RBP12.04□□□□□ -0.48
SMAD3-210ENST00000559092 GATA1P15976 413 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-210ENST00000559092 EIF5AP63241 154 aaKnown RBP12.04□□□□□ -0.48
SMAD3-210ENST00000559092 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
SMAD3-210ENST00000559092 CFAP126Q5VTH2 177 aa12.04□□□□□ -0.48
SMAD3-210ENST00000559092 IGKV3D-20A0A0C4DH25 116 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 TIRAPP58753 221 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 Q86TA4 180 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 FMC1Q96HJ9 113 aa12.03□□□□□ -0.48
SMAD3-210ENST00000559092 BCL2L11O43521 198 aa12.02□□□□□ -0.49
SMAD3-210ENST00000559092 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
SMAD3-210ENST00000559092 ZNF471Q9BX82 626 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-210ENST00000559092 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms