RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 C9JCJ5 164 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 C5orf17Q8NAS9 161 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 TMED6Q8WW62 240 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 C18orf15Q96N68 181 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 TMEM167BQ9NRX6 74 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 EPDR1Q9UM22 224 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
SMAD3-208ENST00000558827 ICOSQ9Y6W8 199 aa8.62□□□□□ -1.03
SMAD3-208ENST00000558827 LOC100131303A0A0U1RQF7 123 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 H3BNG1 76 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 GCGP01275 180 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 IFNA7P01567 189 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 AKR1C8PQ5T2L2 129 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 SUN5Q8TC36 379 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 ASB13Q8WXK3 278 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 SPXQ9BT56 116 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 NDFIP1Q9BT67 221 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 SDF2L1Q9HCN8 221 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 CYTL1Q9NRR1 136 aa8.61□□□□□ -1.03
SMAD3-208ENST00000558827 IGHV3-73A0A0B4J1V6 119 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 CTXND1A0A1B0GTU2 59 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 A0A1B0GV50 99 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 NXPH4O95158 308 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 IGLV2-11P01706 119 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 GYPEP15421 78 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 FLI1Q01543 452 aaPredicted RBP8.6□□□□□ -1.03
SMAD3-208ENST00000558827 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 TNFRSF18Q9Y5U5 241 aa8.6□□□□□ -1.03
SMAD3-208ENST00000558827 K7EQM0 130 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 M0R2P5 195 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 FHITP49789 147 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 CYB561D1Q8N8Q1 229 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 RASL10AQ92737 203 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 UPK3BQ9BT76 320 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
SMAD3-208ENST00000558827 MAP1LC3B2A6NCE7 125 aa8.58□□□□□ -1.04
SMAD3-208ENST00000558827 SIVA1O15304 175 aa8.58□□□□□ -1.04
SMAD3-208ENST00000558827 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
SMAD3-208ENST00000558827 SMUG1Q53HV7 270 aa8.58□□□□□ -1.04
SMAD3-208ENST00000558827 DPPA3Q6W0C5 159 aa8.58□□□□□ -1.04
SMAD3-208ENST00000558827 ARL6IP6Q8N6S5 226 aa8.58□□□□□ -1.04
SMAD3-208ENST00000558827 OR11H4Q8NGC9 324 aa8.58□□□□□ -1.04
SMAD3-208ENST00000558827 MAP1LC3BQ9GZQ8 125 aa8.58□□□□□ -1.04
SMAD3-208ENST00000558827 TRAV4A0A0B4J268 109 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 SERTM2A0A1B0GWG4 89 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 A0A1W2PRE2 83 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 FAM74A7A6NL05 159 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 K7EQD1 137 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 PEX7O00628 323 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 TAAR5O14804 337 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 SRIP30626 198 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 FUSP35637 526 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMAD3-208ENST00000558827 SLAQ13239 276 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 NEGR1Q7Z3B1 354 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 PCNPQ8WW12 178 aaKnown RBP8.57□□□□□ -1.04
SMAD3-208ENST00000558827 KCNS1Q96KK3 526 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 ARL2-SNX15V9GYD0 113 aa8.57□□□□□ -1.04
SMAD3-208ENST00000558827 PGPEP1LA6NFU8 196 aa8.56□□□□□ -1.04
SMAD3-208ENST00000558827 C16orf90A8MZG2 172 aa8.56□□□□□ -1.04
SMAD3-208ENST00000558827 LINC00315P59091 139 aa8.56□□□□□ -1.04
SMAD3-208ENST00000558827 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
SMAD3-208ENST00000558827 ZFP69Q49AA0 526 aa8.56□□□□□ -1.04
SMAD3-208ENST00000558827 TTC32Q5I0X7 151 aa8.56□□□□□ -1.04
SMAD3-208ENST00000558827 CST9LP1Q5W188 147 aa8.56□□□□□ -1.04
SMAD3-208ENST00000558827 hCG_2014768A0A024R1R8 64 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 M0R036 132 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 PFN1P07737 140 aaKnown RBP8.55□□□□□ -1.04
SMAD3-208ENST00000558827 Q6ZNX1 250 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 SPATA12Q7Z6I5 190 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 KCNRGQ8N5I3 272 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 FAM213BQ8TBF2 198 aa8.55□□□□□ -1.04
SMAD3-208ENST00000558827 RYR1P21817 5038 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 LRP1BQ9NZR2 4599 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 TMSB15BA0A087X1C1 80 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 IGKV3D-20A0A0C4DH25 116 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 GRIFINA4D1Z8 144 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 RS1O15537 224 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 ORM1P02763 201 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 ZNF506Q5JVG8 444 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 SAPCD1Q5SSQ6 148 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 Q86TA4 180 aa8.54□□□□□ -1.04
SMAD3-208ENST00000558827 ZNF471Q9BX82 626 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-208ENST00000558827 FBLL1A6NHQ2 334 aaKnown RBP8.53□□□□□ -1.04
SMAD3-208ENST00000558827 PAGE4O60829 102 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 RNASE3P12724 160 aaKnown RBP8.53□□□□□ -1.04
SMAD3-208ENST00000558827 GATA1P15976 413 aaPredicted RBP8.53□□□□□ -1.04
SMAD3-208ENST00000558827 S100A4P26447 101 aaKnown RBP8.53□□□□□ -1.04
SMAD3-208ENST00000558827 CRIP1P50238 77 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 PPT1P50897 306 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 LGALSLQ3ZCW2 172 aaPredicted RBP8.53□□□□□ -1.04
SMAD3-208ENST00000558827 SLC25A29Q8N8R3 303 aa8.53□□□□□ -1.04
SMAD3-208ENST00000558827 SFT2D1Q8WV19 159 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms