RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 MEF2BQ02080 365 aaPredicted RBP10.18□□□□□ -0.78
USP3-205ENST00000557884 ZC2HC1AQ96GY0 325 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 DERL1Q9BUN8 251 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 MDFICQ9P1T7 246 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 ZFP30Q9Y2G7 519 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 TRGV11A0A075B6L2 103 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 IGLL5B9A064 214 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 S100A9P06702 114 aaKnown RBP10.17□□□□□ -0.78
USP3-205ENST00000557884 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
USP3-205ENST00000557884 TCL1AP56279 114 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 ZNF415Q09FC8 603 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 IBA57Q5T440 356 aaKnown RBP10.17□□□□□ -0.78
USP3-205ENST00000557884 TEX261Q6UWH6 196 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 Q6ZTI0 123 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 C11orf52Q96A22 123 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 SDF2L1Q9HCN8 221 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 VAX2Q9UIW0 290 aa10.17□□□□□ -0.78
USP3-205ENST00000557884 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
USP3-205ENST00000557884 TYMSP04818 313 aa10.16□□□□□ -0.78
USP3-205ENST00000557884 CRIP1P50238 77 aa10.16□□□□□ -0.78
USP3-205ENST00000557884 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
USP3-205ENST00000557884 TDRG1Q3Y452 100 aa10.16□□□□□ -0.78
USP3-205ENST00000557884 BAGE2Q86Y30 109 aa10.16□□□□□ -0.78
USP3-205ENST00000557884 IGHV3-16A0A0C4DH30 117 aa10.15□□□□□ -0.78
USP3-205ENST00000557884 PDE6DO43924 150 aa10.15□□□□□ -0.78
USP3-205ENST00000557884 SH2D1AO60880 128 aa10.15□□□□□ -0.78
USP3-205ENST00000557884 LYPD6BQ8NI32 183 aa10.15□□□□□ -0.78
USP3-205ENST00000557884 KCNS1Q96KK3 526 aa10.15□□□□□ -0.78
USP3-205ENST00000557884 MED9Q9NWA0 146 aa10.15□□□□□ -0.78
USP3-205ENST00000557884 MRPL16Q9NX20 251 aaKnown RBP10.15□□□□□ -0.78
USP3-205ENST00000557884 RAB19A4D1S5 217 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 RBFOX3A6NFN3 312 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 FABP5P3A8MUU1 101 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 TAGLN2P37802 199 aaKnown RBP10.14□□□□□ -0.79
USP3-205ENST00000557884 TOR2AQ5JU69 321 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 FAM162BQ5T6X4 162 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 COX8CQ7Z4L0 72 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 LINC00612Q8N6U2 182 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 VPS13DQ5THJ4 4388 aa10.14□□□□□ -0.79
USP3-205ENST00000557884 TRGV2A0A075B6R0 118 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 F5H768 121 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 M0R036 132 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 SPINK4O60575 86 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 ORM1P02763 201 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 ATP5G1P05496 136 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
USP3-205ENST00000557884 TMSB15BA0A087X1C1 80 aa10.12□□□□□ -0.79
USP3-205ENST00000557884 IGKV3D-20A0A0C4DH25 116 aa10.12□□□□□ -0.79
USP3-205ENST00000557884 B4DEV8 164 aa10.12□□□□□ -0.79
USP3-205ENST00000557884 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
USP3-205ENST00000557884 ZNF506Q5JVG8 444 aa10.12□□□□□ -0.79
USP3-205ENST00000557884 PRR27Q6MZM9 219 aa10.12□□□□□ -0.79
USP3-205ENST00000557884 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
USP3-205ENST00000557884 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
USP3-205ENST00000557884 MGST1P10620 155 aaKnown RBP10.11□□□□□ -0.79
USP3-205ENST00000557884 GNG4P50150 75 aa10.11□□□□□ -0.79
USP3-205ENST00000557884 CEBPGP53567 150 aa10.11□□□□□ -0.79
USP3-205ENST00000557884 TMEM88Q6PEY1 159 aa10.11□□□□□ -0.79
USP3-205ENST00000557884 SPXQ9BT56 116 aa10.11□□□□□ -0.79
USP3-205ENST00000557884 EIF5A2Q9GZV4 153 aaKnown RBP10.11□□□□□ -0.79
USP3-205ENST00000557884 GRIFINA4D1Z8 144 aa10.1□□□□□ -0.79
USP3-205ENST00000557884 PGPEP1LA6NFU8 196 aa10.1□□□□□ -0.79
USP3-205ENST00000557884 KRBOX1C9JBD0 128 aa10.1□□□□□ -0.79
USP3-205ENST00000557884 OR5I1Q13606 314 aa10.1□□□□□ -0.79
USP3-205ENST00000557884 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
USP3-205ENST00000557884 FAM210AQ96ND0 272 aa10.1□□□□□ -0.79
USP3-205ENST00000557884 APLNQ9ULZ1 77 aa10.1□□□□□ -0.79
USP3-205ENST00000557884 TRBV20OR9-2A0A075B6H5 130 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 C9JCJ5 164 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 M0R2P5 195 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 IGLV2-8P01709 118 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
USP3-205ENST00000557884 HOXA5P20719 270 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
USP3-205ENST00000557884 ASIPP42127 132 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 RPL19P84098 196 aaKnown RBP10.09□□□□□ -0.79
USP3-205ENST00000557884 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 RYR3Q15413 4870 aa10.09□□□□□ -0.79
USP3-205ENST00000557884 LCE6AA0A183 80 aa10.08□□□□□ -0.8
USP3-205ENST00000557884 H3BVH4 76 aa10.08□□□□□ -0.8
USP3-205ENST00000557884 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
USP3-205ENST00000557884 C9orf85Q96MD7 179 aa10.08□□□□□ -0.8
USP3-205ENST00000557884 PARLQ9H300 379 aa10.08□□□□□ -0.8
USP3-205ENST00000557884 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 LY6G6CO95867 125 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 SFTA3P0C7M3 94 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 TCTAP57738 103 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 LINC00476Q8WZB0 136 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 RASL10AQ92737 203 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 FAM210BQ96KR6 192 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 RYR2Q92736 4967 aa10.07□□□□□ -0.8
USP3-205ENST00000557884 TRAV26-1A0A087WT03 109 aa10.06□□□□□ -0.8
USP3-205ENST00000557884 A0A0J9YY99 117 aa10.06□□□□□ -0.8
USP3-205ENST00000557884 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
USP3-205ENST00000557884 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
USP3-205ENST00000557884 NUDT3O95989 172 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms