RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 CICQ96RK0 1608 aaPredicted RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 HTTP42858 3142 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 LAMA3Q16787 3333 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 IGKV1D-42A0A075B6H8 117 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 A0A0D9SG52 128 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 A0A1B0GU33 70 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 MCRIP1C9JLW8 97 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 H3BPC8 53 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 H3BQF6 201 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 M0R2P5 195 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 CREBL2O60519 120 aaPredicted RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 TRACP01848 142 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 ZNF705BP0CI00 300 aaPredicted RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 COX6A1P12074 109 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 PEBP1P30086 187 aaKnown RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 MRPS36P82909 103 aaKnown RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 CIRBPQ14011 172 aaKnown RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 NNATQ16517 81 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 Q6AWC8 147 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 DPPA3Q6W0C5 159 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 Q8N814 137 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 KLF14Q8TD94 323 aaPredicted RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 DSCR8Q96T75 97 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 Q9H521 79 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 FAM215AQ9Y5M1 114 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 ASXL1Q8IXJ9 1541 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 CASZ1Q86V15 1759 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 MCM3APO60318 1980 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 TNS1Q9HBL0 1735 aaKnown RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 NLRP1Q9C000 1473 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 CLTCQ00610 1675 aaKnown RBP1.99□□□□□ -2.09
FOXN3-217ENST00000557572 RREB1Q92766 1687 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 CPAMD8Q8IZJ3 1885 aa1.99□□□□□ -2.09
FOXN3-217ENST00000557572 DOCK9Q9BZ29 2069 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 CCDC88CQ9P219 2028 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 TOP2AP11388 1531 aaKnown RBP1.98□□□□□ -2.09
FOXN3-217ENST00000557572 ARHGAP5Q13017 1502 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 TRBV10-2A0A0K0K1G8 114 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 C3orf85A0A1B0GTC6 90 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 LOC107986453A0A1B0GWG9 222 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 A0A1W2PRS3 328 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 H7C2G1 150 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 ROMO1P60602 79 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 UBA52P62987 128 aaKnown RBP1.98□□□□□ -2.09
FOXN3-217ENST00000557572 ZNF79Q15937 498 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 KPRPQ5T749 579 aaPredicted RBP1.98□□□□□ -2.09
FOXN3-217ENST00000557572 LINC01545Q5VT33 79 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 SVBPQ8N300 66 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 FAM19A2Q8N3H0 131 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 DEFB123Q8N688 67 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 C10orf105Q8TEF2 133 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 SAR1AQ9NR31 198 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 TAS2R4Q9NYW5 299 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 NKTRP30414 1462 aaKnown RBP1.98□□□□□ -2.09
FOXN3-217ENST00000557572 ZNF462Q96JM2 2506 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 TUBGCP6Q96RT7 1819 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 CASP8AP2Q9UKL3 1982 aa1.98□□□□□ -2.09
FOXN3-217ENST00000557572 SLIT2O94813 1529 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 ZC3H13Q5T200 1668 aaKnown RBP1.97□□□□□ -2.09
FOXN3-217ENST00000557572 PXDNLA1KZ92 1463 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 IGLV4-69A0A075B6H9 119 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 TMEM235A6NFC5 223 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 APOC4-APOC2K7ER74 178 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 APOC2P02655 101 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 MT-ATP8P03928 68 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 SAA1P0DJI8 122 aaPredicted RBP1.97□□□□□ -2.09
FOXN3-217ENST00000557572 NFYAP23511 347 aaPredicted RBP1.97□□□□□ -2.09
FOXN3-217ENST00000557572 ESRGQ1W209 222 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 LGALSLQ3ZCW2 172 aaPredicted RBP1.97□□□□□ -2.09
FOXN3-217ENST00000557572 C1orf134Q5TEV5 83 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 OR4X2Q8NGF9 303 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 PSMF1Q92530 271 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 HHLA3Q9XRX5 114 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 TPRKBQ9Y3C4 175 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 LINC00312Q9Y6C7 94 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 C10orf71Q711Q0 1435 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 TEP1Q99973 2627 aaKnown RBP1.97□□□□□ -2.09
FOXN3-217ENST00000557572 ABCA3Q99758 1704 aa1.97□□□□□ -2.09
FOXN3-217ENST00000557572 CROCC2H7BZ55 1655 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 MYO9BQ13459 2157 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 ZSWIM8A7E2V4 1837 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 TMEM131LA2VDJ0 1609 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 NCOR1O75376 2440 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 IGHV3OR16-8A0A075B7F1 116 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 TRAV1-1A0A0B4J248 108 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 IGHV1-18A0A0C4DH31 117 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 PNMA8CA0A1B0GUJ8 204 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 hDV103S1A0JD37 113 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 OR51F1A6NGY5 319 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 COLCA2A8K830 154 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 ZNF736B4DX44 427 aaPredicted RBP1.96□□□□□ -2.1
FOXN3-217ENST00000557572 TMEM262E9PQX1 116 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 RPL36A-HNRNPH2H7BZ11 118 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 EDF1O60869 148 aaKnown RBP1.96□□□□□ -2.1
FOXN3-217ENST00000557572 CPSF4O95639 269 aaKnown RBP1.96□□□□□ -2.1
FOXN3-217ENST00000557572 PMP2P02689 132 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 RBP4P02753 201 aa1.96□□□□□ -2.1
FOXN3-217ENST00000557572 CISD3P0C7P0 127 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms